About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828349
Gene symbol: Snhg11
Gene name: small nucleolar RNA host gene 11
Probe: T40390
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014130_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_02
TS23: neural retina Strong Regionally restricted euxassay_014130_02
Specimen euxassay_014130_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_03
TS23: neural retina Strong Regionally restricted euxassay_014130_03
Specimen euxassay_014130_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_04
TS23: neural retina Strong Regionally restricted euxassay_014130_04
Specimen euxassay_014130_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_05
TS23: neural retina Strong Regionally restricted euxassay_014130_05
Specimen euxassay_014130_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_06
TS23: facial ganglion Strong Regionally restricted euxassay_014130_06
Specimen euxassay_014130_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_07
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_07
TS23: facial ganglion Strong Regionally restricted euxassay_014130_07
Specimen euxassay_014130_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_08
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_08
TS23: facial ganglion Strong Regionally restricted euxassay_014130_08
Specimen euxassay_014130_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_09
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_09
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_09
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014130_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_09
Specimen euxassay_014130_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_10
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_10
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_10
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_10
Specimen euxassay_014130_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_11
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_11
TS23: trigeminal nerve Strong Regionally restricted euxassay_014130_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_11
Specimen euxassay_014130_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_12
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_12
Specimen euxassay_014130_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_13
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_13
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_13
Specimen euxassay_014130_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_14
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_14
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_14
Specimen euxassay_014130_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_15
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_15
Specimen euxassay_014130_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_16
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_16
Specimen euxassay_014130_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_17
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_17
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_17
Specimen euxassay_014130_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_18
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_18
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_18
Specimen euxassay_014130_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_19
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_19
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_19
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_19
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_19
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_19
TS23: trigeminal nerve Strong Regionally restricted euxassay_014130_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_19
Specimen euxassay_014130_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_20
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_20
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_20
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_20
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_20
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_20
Specimen euxassay_014130_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_21
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_21
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_21
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_21
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_21
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_21
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014130_21
TS23: facial ganglion Strong Regionally restricted euxassay_014130_21
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_21
Specimen euxassay_014130_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_22
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_22
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_22
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_22
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_22
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_22
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014130_22
TS23: facial ganglion Strong Regionally restricted euxassay_014130_22
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_22
Specimen euxassay_014130_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_23
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_23
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_23
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_23
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_23
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_23
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_23
TS23: facial ganglion Strong Regionally restricted euxassay_014130_23
Specimen euxassay_014130_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_24
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_24
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_24
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_24
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_24
TS23: facial ganglion Strong Regionally restricted euxassay_014130_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory