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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828332
Gene symbol: Smpd3
Gene name: sphingomyelin phosphodiesterase 3, neutral
Probe: MGC clone 57983
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004706_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_01
TS23: mandible Strong Regionally restricted euxassay_004706_01
TS23: rib Strong Regionally restricted euxassay_004706_01
TS23: femur Strong Regionally restricted euxassay_004706_01
TS23: tibia Strong Regionally restricted euxassay_004706_01
TS23: fibula Strong Regionally restricted euxassay_004706_01
TS23: humerus Strong Regionally restricted euxassay_004706_01
TS23: brain Moderate Regionally restricted euxassay_004706_01
TS23: stomach Moderate Regionally restricted euxassay_004706_01
Specimen euxassay_004706_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_02
TS23: mandible Strong Regionally restricted euxassay_004706_02
TS23: rib Strong Regionally restricted euxassay_004706_02
TS23: femur Strong Regionally restricted euxassay_004706_02
TS23: humerus Strong Regionally restricted euxassay_004706_02
TS23: scapula Strong Regionally restricted euxassay_004706_02
TS23: brain Moderate Regionally restricted euxassay_004706_02
TS23: stomach Moderate Regionally restricted euxassay_004706_02
Specimen euxassay_004706_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_03
TS23: mandible Strong Regionally restricted euxassay_004706_03
TS23: maxilla Strong Regionally restricted euxassay_004706_03
TS23: rib Strong Regionally restricted euxassay_004706_03
TS23: femur Strong Regionally restricted euxassay_004706_03
TS23: humerus Strong Regionally restricted euxassay_004706_03
TS23: scapula Strong Regionally restricted euxassay_004706_03
TS23: brain Moderate Regionally restricted euxassay_004706_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_03
TS23: stomach Moderate Regionally restricted euxassay_004706_03
Specimen euxassay_004706_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_04
TS23: maxilla Strong Regionally restricted euxassay_004706_04
TS23: mandible Strong Regionally restricted euxassay_004706_04
TS23: rib Strong Regionally restricted euxassay_004706_04
TS23: femur Strong Regionally restricted euxassay_004706_04
TS23: scapula Strong Regionally restricted euxassay_004706_04
TS23: brain Moderate Regionally restricted euxassay_004706_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_04
TS23: stomach Moderate Regionally restricted euxassay_004706_04
Specimen euxassay_004706_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_05
TS23: maxilla Strong Regionally restricted euxassay_004706_05
TS23: mandible Strong Regionally restricted euxassay_004706_05
TS23: rib Strong Regionally restricted euxassay_004706_05
TS23: brain Moderate Regionally restricted euxassay_004706_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_05
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_05
TS23: stomach Moderate Regionally restricted euxassay_004706_05
Specimen euxassay_004706_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_06
TS23: maxilla Strong Regionally restricted euxassay_004706_06
TS23: mandible Strong Regionally restricted euxassay_004706_06
TS23: rib Strong Regionally restricted euxassay_004706_06
TS23: brain Moderate Regionally restricted euxassay_004706_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_06
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_06
TS23: stomach Moderate Regionally restricted euxassay_004706_06
Specimen euxassay_004706_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_07
TS23: maxilla Strong Regionally restricted euxassay_004706_07
TS23: mandible Strong Regionally restricted euxassay_004706_07
TS23: rib Strong Regionally restricted euxassay_004706_07
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_004706_07
TS23: brain Moderate Regionally restricted euxassay_004706_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004706_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004706_07
TS23: stomach Moderate Regionally restricted euxassay_004706_07
Specimen euxassay_004706_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_08
TS23: maxilla Strong Regionally restricted euxassay_004706_08
TS23: mandible Strong Regionally restricted euxassay_004706_08
TS23: rib Strong Regionally restricted euxassay_004706_08
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_004706_08
TS23: axial skeleton Strong Regionally restricted euxassay_004706_08
TS23: brain Moderate Regionally restricted euxassay_004706_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004706_08
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_004706_08
TS23: stomach Moderate Regionally restricted euxassay_004706_08
Specimen euxassay_004706_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_09
TS23: maxilla Strong Regionally restricted euxassay_004706_09
TS23: mandible Strong Regionally restricted euxassay_004706_09
TS23: palatal shelf Strong Regionally restricted euxassay_004706_09
TS23: clavicle Strong Regionally restricted euxassay_004706_09
TS23: axial skeleton Strong Regionally restricted euxassay_004706_09
TS23: brain Moderate Regionally restricted euxassay_004706_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_004706_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_004706_09
TS23: stomach Moderate Regionally restricted euxassay_004706_09
Specimen euxassay_004706_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_10
TS23: mandible Strong Regionally restricted euxassay_004706_10
TS23: palatal shelf Strong Regionally restricted euxassay_004706_10
TS23: maxilla Strong Regionally restricted euxassay_004706_10
TS23: clavicle Strong Regionally restricted euxassay_004706_10
TS23: axial skeleton Strong Regionally restricted euxassay_004706_10
TS23: brain Moderate Regionally restricted euxassay_004706_10
TS23: spinal cord Moderate Regionally restricted euxassay_004706_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_004706_10
TS23: midgut Moderate Regionally restricted euxassay_004706_10
Specimen euxassay_004706_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_11
TS23: mandible Strong Regionally restricted euxassay_004706_11
TS23: maxilla Strong Regionally restricted euxassay_004706_11
TS23: palatal shelf Strong Regionally restricted euxassay_004706_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_004706_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_004706_11
TS23: axial skeleton Strong Regionally restricted euxassay_004706_11
TS23: brain Moderate Regionally restricted euxassay_004706_11
TS23: spinal cord Moderate Regionally restricted euxassay_004706_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_004706_11
TS23: midgut Moderate Regionally restricted euxassay_004706_11
Specimen euxassay_004706_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_12
TS23: maxilla Strong Regionally restricted euxassay_004706_12
TS23: palatal shelf Strong Regionally restricted euxassay_004706_12
TS23: mandible Strong Regionally restricted euxassay_004706_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_004706_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_004706_12
TS23: brain Moderate Regionally restricted euxassay_004706_12
TS23: spinal cord Moderate Regionally restricted euxassay_004706_12
TS23: thoracic ganglion Moderate Regionally restricted euxassay_004706_12
TS23: midgut Moderate Regionally restricted euxassay_004706_12
Specimen euxassay_004706_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_13
TS23: palatal shelf Strong Regionally restricted euxassay_004706_13
TS23: brain Moderate Regionally restricted euxassay_004706_13
TS23: spinal cord Moderate Regionally restricted euxassay_004706_13
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_004706_13
TS23: midgut Moderate Regionally restricted euxassay_004706_13
Specimen euxassay_004706_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_14
TS23: palatal shelf Strong Regionally restricted euxassay_004706_14
TS23: mandible Strong Regionally restricted euxassay_004706_14
TS23: brain Moderate Regionally restricted euxassay_004706_14
TS23: spinal cord Moderate Regionally restricted euxassay_004706_14
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_004706_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_004706_14
TS23: midgut Moderate Regionally restricted euxassay_004706_14
Specimen euxassay_004706_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_15
TS23: maxilla Strong Regionally restricted euxassay_004706_15
TS23: mandible Strong Regionally restricted euxassay_004706_15
TS23: palatal shelf Strong Regionally restricted euxassay_004706_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_004706_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_004706_15
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_004706_15
TS23: axial skeleton Strong Regionally restricted euxassay_004706_15
TS23: brain Moderate Regionally restricted euxassay_004706_15
TS23: spinal cord Moderate Regionally restricted euxassay_004706_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_004706_15
TS23: midgut Moderate Regionally restricted euxassay_004706_15
Specimen euxassay_004706_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_16
TS23: maxilla Strong Regionally restricted euxassay_004706_16
TS23: palatal shelf Strong Regionally restricted euxassay_004706_16
TS23: mandible Strong Regionally restricted euxassay_004706_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_004706_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_004706_16
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_004706_16
TS23: axial skeleton Strong Regionally restricted euxassay_004706_16
TS23: brain Moderate Regionally restricted euxassay_004706_16
TS23: spinal cord Moderate Regionally restricted euxassay_004706_16
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_004706_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_004706_16
TS23: midgut Moderate Regionally restricted euxassay_004706_16
Specimen euxassay_004706_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_17
TS23: maxilla Strong Regionally restricted euxassay_004706_17
TS23: palatal shelf Strong Regionally restricted euxassay_004706_17
TS23: mandible Strong Regionally restricted euxassay_004706_17
TS23: rib Strong Regionally restricted euxassay_004706_17
TS23: clavicle Strong Regionally restricted euxassay_004706_17
TS23: axial skeleton Strong Regionally restricted euxassay_004706_17
TS23: brain Moderate Regionally restricted euxassay_004706_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_17
TS23: trigeminal nerve Moderate Regionally restricted euxassay_004706_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_004706_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_004706_17
TS23: midgut Moderate Regionally restricted euxassay_004706_17
Specimen euxassay_004706_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_18
TS23: maxilla Strong Regionally restricted euxassay_004706_18
TS23: palatal shelf Strong Regionally restricted euxassay_004706_18
TS23: mandible Strong Regionally restricted euxassay_004706_18
TS23: rib Strong Regionally restricted euxassay_004706_18
TS23: clavicle Strong Regionally restricted euxassay_004706_18
TS23: axial skeleton Strong Regionally restricted euxassay_004706_18
TS23: brain Moderate Regionally restricted euxassay_004706_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004706_18
TS23: cervical ganglion Moderate Regionally restricted euxassay_004706_18
TS23: midgut Moderate Regionally restricted euxassay_004706_18
Specimen euxassay_004706_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_19
TS23: maxilla Strong Regionally restricted euxassay_004706_19
TS23: mandible Strong Regionally restricted euxassay_004706_19
TS23: rib Strong Regionally restricted euxassay_004706_19
TS23: femur Strong Regionally restricted euxassay_004706_19
TS23: clavicle Strong Regionally restricted euxassay_004706_19
TS23: brain Moderate Regionally restricted euxassay_004706_19
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004706_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_004706_19
Specimen euxassay_004706_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_20
TS23: maxilla Strong Regionally restricted euxassay_004706_20
TS23: mandible Strong Regionally restricted euxassay_004706_20
TS23: rib Strong Regionally restricted euxassay_004706_20
TS23: femur Strong Regionally restricted euxassay_004706_20
TS23: clavicle Strong Regionally restricted euxassay_004706_20
TS23: brain Moderate Regionally restricted euxassay_004706_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_20
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004706_20
Specimen euxassay_004706_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_21
TS23: maxilla Strong Regionally restricted euxassay_004706_21
TS23: mandible Strong Regionally restricted euxassay_004706_21
TS23: rib Strong Regionally restricted euxassay_004706_21
TS23: femur Strong Regionally restricted euxassay_004706_21
TS23: clavicle Strong Regionally restricted euxassay_004706_21
TS23: brain Moderate Regionally restricted euxassay_004706_21
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_21
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_004706_21
Specimen euxassay_004706_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_22
TS23: maxilla Strong Regionally restricted euxassay_004706_22
TS23: mandible Strong Regionally restricted euxassay_004706_22
TS23: rib Strong Regionally restricted euxassay_004706_22
TS23: femur Strong Regionally restricted euxassay_004706_22
TS23: clavicle Strong Regionally restricted euxassay_004706_22
TS23: scapula Strong Regionally restricted euxassay_004706_22
TS23: brain Moderate Regionally restricted euxassay_004706_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_22
TS23: facial ganglion Moderate Regionally restricted euxassay_004706_22
Specimen euxassay_004706_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_23
TS23: maxilla Strong Regionally restricted euxassay_004706_23
TS23: mandible Strong Regionally restricted euxassay_004706_23
TS23: rib Strong Regionally restricted euxassay_004706_23
TS23: femur Strong Regionally restricted euxassay_004706_23
TS23: tibia Strong Regionally restricted euxassay_004706_23
TS23: fibula Strong Regionally restricted euxassay_004706_23
TS23: humerus Strong Regionally restricted euxassay_004706_23
TS23: scapula Strong Regionally restricted euxassay_004706_23
TS23: brain Moderate Regionally restricted euxassay_004706_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004706_23
Specimen euxassay_004706_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004706_24
TS23: maxilla Strong Regionally restricted euxassay_004706_24
TS23: mandible Strong Regionally restricted euxassay_004706_24
TS23: rib Strong Regionally restricted euxassay_004706_24
TS23: fibula Strong Regionally restricted euxassay_004706_24
TS23: tibia Strong Regionally restricted euxassay_004706_24
TS23: humerus Strong Regionally restricted euxassay_004706_24
TS23: scapula Strong Regionally restricted euxassay_004706_24
TS23: brain Moderate Regionally restricted euxassay_004706_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory