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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828331
Gene symbol: Smpd1
Gene name: sphingomyelin phosphodiesterase 1, acid lysosomal
Probe: MGC clone 11522
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006555_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_04
Specimen euxassay_006555_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_05
Specimen euxassay_006555_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_06
Specimen euxassay_006555_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_07
Specimen euxassay_006555_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_08
TS23: choroid invagination Strong Regionally restricted euxassay_006555_08
Specimen euxassay_006555_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_09
TS23: choroid invagination Strong Regionally restricted euxassay_006555_09
Specimen euxassay_006555_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_10
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_10
Specimen euxassay_006555_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_11
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_11
Specimen euxassay_006555_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_12
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_12
Specimen euxassay_006555_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_13
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_13
Specimen euxassay_006555_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_14
Specimen euxassay_006555_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_15
Specimen euxassay_006555_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_16
Specimen euxassay_006555_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_17
TS23: choroid invagination Strong Regionally restricted euxassay_006555_17
Specimen euxassay_006555_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_18
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_18
Specimen euxassay_006555_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_19
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_19
Specimen euxassay_006555_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_20
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_20
Specimen euxassay_006555_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Strong Regionally restricted euxassay_006555_21
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_21
Specimen euxassay_006555_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_22
Specimen euxassay_006555_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_006555_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory