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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828315
Gene symbol: Smad4
Gene name: SMAD family member 4
Probe: MGC clone 54745
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005333_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_01
Specimen euxassay_005333_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_02
Specimen euxassay_005333_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_03
Specimen euxassay_005333_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_04
TS23: facial ganglion Moderate Regionally restricted euxassay_005333_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_04
Specimen euxassay_005333_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_05
Specimen euxassay_005333_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_06
Specimen euxassay_005333_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_005333_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005333_07
Specimen euxassay_005333_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005333_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_005333_08 trigeminal motor nucleus
Specimen euxassay_005333_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005333_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_005333_09 facial motor nucleus
Specimen euxassay_005333_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005333_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_005333_10 facial motor nucleus
Specimen euxassay_005333_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005333_11
Specimen euxassay_005333_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_005333_12
Specimen euxassay_005333_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005333_15
Specimen euxassay_005333_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005333_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_005333_16 facial motor nucleus
Specimen euxassay_005333_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_005333_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005333_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_005333_17 facial motor nucleus
Specimen euxassay_005333_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_005333_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005333_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_005333_18 trigeminal motor nucleus
Specimen euxassay_005333_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_005333_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005333_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_19
Specimen euxassay_005333_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_20
Specimen euxassay_005333_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_21
TS23: facial ganglion Moderate Regionally restricted euxassay_005333_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_21
Specimen euxassay_005333_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005333_22
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_22
Specimen euxassay_005333_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_23
Specimen euxassay_005333_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_005333_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory