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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828305
Gene symbol: Slitrk2
Gene name: SLIT and NTRK-like family, member 2
Probe: T37055
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012159_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_02
Specimen euxassay_012159_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_03
TS23: facial ganglion Moderate Regionally restricted euxassay_012159_03
Specimen euxassay_012159_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_04
TS23: facial ganglion Moderate Regionally restricted euxassay_012159_04
Specimen euxassay_012159_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_05
TS23: facial ganglion Moderate Regionally restricted euxassay_012159_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012159_05
Specimen euxassay_012159_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012159_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012159_06
Specimen euxassay_012159_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012159_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_012159_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012159_07
Specimen euxassay_012159_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012159_08
Specimen euxassay_012159_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_09
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012159_09
Specimen euxassay_012159_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012159_10
Specimen euxassay_012159_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012159_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_012159_11
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_012159_11
Specimen euxassay_012159_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_012159_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_12
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_012159_12
Specimen euxassay_012159_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012159_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_13
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_012159_13
Specimen euxassay_012159_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_14
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_012159_14
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012159_14
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_012159_14
Specimen euxassay_012159_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012159_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012159_15
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_012159_15
Specimen euxassay_012159_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_012159_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012159_16
Specimen euxassay_012159_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_17
TS23: trigeminal nerve Moderate Regionally restricted euxassay_012159_17
Specimen euxassay_012159_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012159_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_18
TS23: trigeminal nerve Moderate Regionally restricted euxassay_012159_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012159_18
Specimen euxassay_012159_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_19
TS23: facial ganglion Moderate Regionally restricted euxassay_012159_19
Specimen euxassay_012159_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_20
TS23: trigeminal nerve Moderate Regionally restricted euxassay_012159_20
TS23: facial ganglion Moderate Regionally restricted euxassay_012159_20
Specimen euxassay_012159_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012159_21
Specimen euxassay_012159_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_22
Specimen euxassay_012159_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012159_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_23
Specimen euxassay_012159_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_012159_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/28/2026
MGI 6.24 		The Jackson Laboratory