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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828269
Gene symbol: Slc6a7
Gene name: solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
Probe: T30469
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: thalamus Moderate
TS23: midbrain Moderate
TS23: pons Weak
TS23: medulla oblongata Weak
Specimen euxassay_012672_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_04
Specimen euxassay_012672_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_05
Specimen euxassay_012672_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012672_06
Specimen euxassay_012672_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_07
TS23: pons mantle layer Weak Regionally restricted euxassay_012672_07
Specimen euxassay_012672_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_08
TS23: pons mantle layer Weak Regionally restricted euxassay_012672_08
Specimen euxassay_012672_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_09
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012672_09
Specimen euxassay_012672_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012672_10
Specimen euxassay_012672_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012672_11
Specimen euxassay_012672_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_12
Specimen euxassay_012672_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_13
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012672_13
Specimen euxassay_012672_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_14
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_14
TS23: pons mantle layer Weak Regionally restricted euxassay_012672_14
Specimen euxassay_012672_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012672_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_15
Specimen euxassay_012672_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012672_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012672_16
Specimen euxassay_012672_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_17
Specimen euxassay_012672_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_012672_18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory