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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828267
Gene symbol: Slc6a5
Gene name: solute carrier family 6 (neurotransmitter transporter, glycine), member 5
Probe: T56014
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019693_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_01
TS23: lens Moderate Regionally restricted euxassay_019693_01
Specimen euxassay_019693_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_02
Specimen euxassay_019693_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_03
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_03
Specimen euxassay_019693_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_04
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_04
Specimen euxassay_019693_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_019693_05
Specimen euxassay_019693_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_06
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_06
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_06
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_06
Specimen euxassay_019693_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_07
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_07
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_07
Specimen euxassay_019693_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_08
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_019693_08
TS23: heart ventricle Moderate Spotted euxassay_019693_08
Specimen euxassay_019693_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_09
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_09
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019693_09
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_09
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_09
TS23: heart ventricle Moderate Spotted euxassay_019693_09
TS23: metanephros Moderate Regionally restricted euxassay_019693_09
Specimen euxassay_019693_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_10
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_10
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019693_10
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_10
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_10
TS23: heart ventricle Moderate Spotted euxassay_019693_10
Specimen euxassay_019693_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_11
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_11
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019693_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019693_11
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_11
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_11
TS23: heart ventricle Moderate Spotted euxassay_019693_11
Specimen euxassay_019693_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_12
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_12
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_12
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_12
TS23: heart ventricle Moderate Spotted euxassay_019693_12
Specimen euxassay_019693_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_13
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_13
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_13
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_13
TS23: heart ventricle Weak Spotted euxassay_019693_13
Specimen euxassay_019693_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_14
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_14
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_14
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_14
TS23: heart ventricle Moderate Spotted euxassay_019693_14
Specimen euxassay_019693_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_15
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_15
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_15
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_15
TS23: heart ventricle Moderate Spotted euxassay_019693_15
Specimen euxassay_019693_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_16
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019693_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019693_16
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_16
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_16
TS23: heart ventricle Weak Spotted euxassay_019693_16
Specimen euxassay_019693_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_17
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_019693_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019693_17
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_17
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_17
TS23: heart ventricle Weak Spotted euxassay_019693_17
Specimen euxassay_019693_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_18
TS23: pons mantle layer Strong Regionally restricted euxassay_019693_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_019693_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019693_18
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_18
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_18
TS23: heart ventricle Moderate Spotted euxassay_019693_18
Specimen euxassay_019693_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_019693_19
TS23: midbrain mantle layer Weak Regionally restricted euxassay_019693_19
TS23: dorsal grey horn Strong Regionally restricted euxassay_019693_19
TS23: ventral grey horn Strong Regionally restricted euxassay_019693_19
TS23: heart ventricle Moderate Spotted euxassay_019693_19
TS23: metanephros Moderate Regionally restricted euxassay_019693_19
Specimen euxassay_019693_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_019693_20
TS23: metanephros Moderate Regionally restricted euxassay_019693_20
Specimen euxassay_019693_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019693_21
Specimen euxassay_019693_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_22
Specimen euxassay_019693_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_019693_23
Specimen euxassay_019693_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_019693_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory