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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828262
Gene symbol: Slc6a17
Gene name: solute carrier family 6 (neurotransmitter transporter), member 17
Probe: T56062
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex Strong
TS23: corpus striatum Weak
TS23: thalamus Weak
TS23: hypothalamus Moderate
TS23: midbrain Strong
TS23: cerebellum Weak
TS23: pons Moderate
TS23: medulla oblongata Moderate
Specimen euxassay_019739_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_02
Specimen euxassay_019739_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_03
Specimen euxassay_019739_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_04
Specimen euxassay_019739_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_05
Specimen euxassay_019739_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_06
Specimen euxassay_019739_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_07
Specimen euxassay_019739_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_08
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_08
Specimen euxassay_019739_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_09
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019739_09
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_09
Specimen euxassay_019739_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019739_10
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_10
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_10
Specimen euxassay_019739_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019739_11
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_11
Specimen euxassay_019739_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_12
Specimen euxassay_019739_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_13
TS23: metencephalon floor plate Weak Regionally restricted euxassay_019739_13
Specimen euxassay_019739_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_14
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019739_14
TS23: metencephalon floor plate Weak Regionally restricted euxassay_019739_14
Specimen euxassay_019739_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019739_15
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_15
Specimen euxassay_019739_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019739_16
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_16
Specimen euxassay_019739_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019739_17
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_019739_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_17
Specimen euxassay_019739_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_18
Specimen euxassay_019739_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_19
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_019739_19
Specimen euxassay_019739_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_20
Specimen euxassay_019739_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_21
Specimen euxassay_019739_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_22
Specimen euxassay_019739_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019739_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory