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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828161
Gene symbol: Slc25a39
Gene name: solute carrier family 25, member 39
Probe: IMAGE clone 3154476
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000139_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: scapula Strong Regionally restricted euxassay_000139_03
TS23: rib Moderate Uniform euxassay_000139_03
TS23: liver Moderate Spotted euxassay_000139_03
Specimen euxassay_000139_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: scapula Moderate Uniform euxassay_000139_04
TS23: thoracic segment skeleton Moderate Uniform euxassay_000139_04
TS23: rib Moderate Uniform euxassay_000139_04
TS23: liver Weak Spotted euxassay_000139_04
TS23: cranial ganglion Moderate Uniform euxassay_000139_04
TS23: trigeminal ganglion Moderate Uniform euxassay_000139_04
TS23: vestibulo-cochlear ganglion Moderate Uniform euxassay_000139_04
TS23: vagus ganglion Moderate Uniform euxassay_000139_04
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_000139_04
Specimen euxassay_000139_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_000139_05
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_000139_05
TS23: skeleton Weak Regionally restricted euxassay_000139_05
Specimen euxassay_000139_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Spotted euxassay_000139_06
TS23: rib Weak Spotted euxassay_000139_06
Specimen euxassay_000139_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000139_07
TS23: sympathetic nervous system Moderate Regionally restricted euxassay_000139_07
TS23: dorsal root ganglion Moderate Uniform euxassay_000139_07
TS23: liver Moderate Spotted euxassay_000139_07
Specimen euxassay_000139_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000139_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000139_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_000139_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_000139_08
TS23: hypogastric plexus Moderate Regionally restricted euxassay_000139_08
TS23: liver Moderate Spotted euxassay_000139_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_08
Specimen euxassay_000139_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_000139_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_09
TS23: vagus ganglion Strong Regionally restricted euxassay_000139_09
TS23: liver Moderate Spotted euxassay_000139_09
TS23: gut Moderate Regionally restricted euxassay_000139_09
TS23: autonomic nervous system Moderate Regionally restricted euxassay_000139_09
TS23: autonomic nerve plexus Moderate Regionally restricted euxassay_000139_09
TS23: telencephalon ventricular layer Strong Uniform euxassay_000139_09
Specimen euxassay_000139_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000139_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_10
TS23: liver Moderate Spotted euxassay_000139_10
TS23: metanephros Weak Regionally restricted euxassay_000139_10
TS23: spleen primordium Weak Regionally restricted euxassay_000139_10
TS23: autonomic nervous system Moderate Regionally restricted euxassay_000139_10
TS23: autonomic nerve plexus Moderate Regionally restricted euxassay_000139_10
TS23: telencephalon ventricular layer Strong Uniform euxassay_000139_10
TS23: vibrissa Weak Regionally restricted euxassay_000139_10
Specimen euxassay_000139_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000139_11
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_000139_11
TS23: vagus ganglion Moderate Regionally restricted euxassay_000139_11
TS23: autonomic nerve plexus Moderate Regionally restricted euxassay_000139_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_11
TS23: metanephros Weak Regionally restricted euxassay_000139_11
TS23: nucleus pulposus Weak Regionally restricted euxassay_000139_11
TS23: telencephalon ventricular layer Strong Uniform euxassay_000139_11
TS23: vibrissa Moderate Regionally restricted euxassay_000139_11
Specimen euxassay_000139_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000139_12
TS23: trigeminal ganglion Strong Uniform euxassay_000139_12
TS23: oculomotor nerve Strong Uniform euxassay_000139_12
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_12
TS23: vibrissa Moderate Regionally restricted euxassay_000139_12
TS23: liver Moderate Spotted euxassay_000139_12
TS23: pancreas Moderate Regionally restricted euxassay_000139_12
TS23: autonomic nerve plexus Weak Regionally restricted euxassay_000139_12
TS23: midbrain ventricular layer Weak Graded euxassay_000139_12
TS23: trigeminal nerve ophthalmic division Moderate Regionally restricted euxassay_000139_12
TS23: optic nerve Moderate Regionally restricted euxassay_000139_12
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_000139_12
TS23: trigeminal nerve mandibular division Moderate Regionally restricted euxassay_000139_12
TS23: physiological umbilical hernia Moderate Uniform euxassay_000139_12
Specimen euxassay_000139_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Spotted euxassay_000139_13
TS23: pancreas Strong Spotted euxassay_000139_13
TS23: dorsal root ganglion Weak Uniform euxassay_000139_13
TS23: telencephalon ventricular layer Moderate Uniform euxassay_000139_13
TS23: physiological umbilical hernia Moderate Uniform euxassay_000139_13
Specimen euxassay_000139_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foregut-midgut junction lumen Moderate Regionally restricted euxassay_000139_14
TS23: autonomic nerve plexus Moderate Regionally restricted euxassay_000139_14
TS23: liver Strong Regionally restricted euxassay_000139_14
TS23: midbrain ventricular layer Weak Uniform euxassay_000139_14
TS23: trigeminal nerve mandibular division Moderate Single cells euxassay_000139_14
TS23: physiological umbilical hernia Moderate Uniform euxassay_000139_14
Specimen euxassay_000139_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Uniform euxassay_000139_15
TS23: gut Moderate Regionally restricted euxassay_000139_15
TS23: foregut-midgut junction lumen Moderate Regionally restricted euxassay_000139_15
TS23: autonomic nerve plexus Weak Regionally restricted euxassay_000139_15
TS23: liver Moderate Spotted euxassay_000139_15
TS23: physiological umbilical hernia Moderate Uniform euxassay_000139_15
Specimen euxassay_000139_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: gut Moderate Regionally restricted euxassay_000139_16
TS23: foregut-midgut junction lumen Moderate Regionally restricted euxassay_000139_16
TS23: liver Strong Spotted euxassay_000139_16
TS23: dorsal root ganglion Strong Uniform euxassay_000139_16
TS23: physiological umbilical hernia Moderate Uniform euxassay_000139_16
Specimen euxassay_000139_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Uniform euxassay_000139_17
TS23: liver Strong Uniform euxassay_000139_17
TS23: trigeminal ganglion Strong Uniform euxassay_000139_17
TS23: vagus ganglion Strong Uniform euxassay_000139_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000139_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000139_17
Specimen euxassay_000139_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_18
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000139_18
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000139_18
TS23: dorsal root ganglion Moderate Uniform euxassay_000139_18
TS23: vagus ganglion Moderate Uniform euxassay_000139_18
TS23: facial ganglion Moderate Uniform euxassay_000139_18
TS23: oculomotor nerve Moderate Uniform euxassay_000139_18
TS23: facial nerve Moderate Uniform euxassay_000139_18
TS23: telencephalon ventricular layer Moderate Graded euxassay_000139_18
TS23: liver Strong Uniform euxassay_000139_18
TS23: physiological umbilical hernia Strong Regionally restricted euxassay_000139_18
TS23: spleen primordium Moderate Uniform euxassay_000139_18
Specimen euxassay_000139_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_000139_19
TS23: upper jaw incisor Moderate Regionally restricted euxassay_000139_19
TS23: liver Moderate Uniform euxassay_000139_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_19
TS23: urinary system Moderate Regionally restricted euxassay_000139_19
TS23: metanephros Moderate Regionally restricted euxassay_000139_19
TS23: physiological umbilical hernia Strong Regionally restricted euxassay_000139_19
TS23: spleen primordium Weak Uniform euxassay_000139_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000139_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_000139_19
TS23: vagus ganglion Moderate Regionally restricted euxassay_000139_19
TS23: telencephalon ventricular layer Moderate Graded euxassay_000139_19
Specimen euxassay_000139_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_20
TS23: telencephalon ventricular layer Moderate Graded euxassay_000139_20
Specimen euxassay_000139_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000139_21
TS23: liver Moderate Regionally restricted euxassay_000139_21
TS23: testis Strong Regionally restricted euxassay_000139_21
TS23: telencephalon ventricular layer Moderate Graded euxassay_000139_21
Specimen euxassay_000139_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: testis Moderate Uniform euxassay_000139_22
TS23: liver Strong Uniform euxassay_000139_22
TS23: trigeminal nerve Weak Uniform euxassay_000139_22
TS23: trigeminal nerve ophthalmic division Weak Uniform euxassay_000139_22
TS23: trigeminal ganglion Weak Uniform euxassay_000139_22
TS23: telencephalon ventricular layer Moderate Uniform euxassay_000139_22
Specimen euxassay_000139_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_000139_23
TS23: liver Strong Uniform euxassay_000139_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory