About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828145
Gene symbol: Slc25a1
Gene name: solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
Probe: IMAGE clone 1547830
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: medulla oblongata Moderate
TS23: pons Moderate
Specimen euxassay_007829_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_007829_01
Specimen euxassay_007829_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Strong Regionally restricted euxassay_007829_02
Specimen euxassay_007829_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_03
Specimen euxassay_007829_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_04
Specimen euxassay_007829_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_05
Specimen euxassay_007829_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_06
Specimen euxassay_007829_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_07
TS23: midgut loop Weak Regionally restricted euxassay_007829_07
Specimen euxassay_007829_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_007829_08 trigeminal motor nucleus
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_08
TS23: trigeminal nerve Weak Regionally restricted euxassay_007829_08
TS23: midgut loop Weak Regionally restricted euxassay_007829_08
Specimen euxassay_007829_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_09
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007829_09
TS23: midgut loop Weak Regionally restricted euxassay_007829_09
Specimen euxassay_007829_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_10 facial motor nucleus
TS23: cervical ganglion Weak Regionally restricted euxassay_007829_10
TS23: clavicle Weak Regionally restricted euxassay_007829_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_10
TS23: midgut loop Weak Regionally restricted euxassay_007829_10
Specimen euxassay_007829_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Regionally restricted euxassay_007829_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_11 facial motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_007829_11
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_007829_11
TS23: clavicle Weak Regionally restricted euxassay_007829_11
TS23: midgut loop Weak Regionally restricted euxassay_007829_11
Specimen euxassay_007829_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_007829_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_007829_12
TS23: midgut loop Weak Regionally restricted euxassay_007829_12
Specimen euxassay_007829_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_13 dorsal motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_007829_13
TS23: thoracic ganglion Weak Regionally restricted euxassay_007829_13
TS23: midgut loop Weak Regionally restricted euxassay_007829_13
Specimen euxassay_007829_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_14 dorsal motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_007829_14
TS23: midgut loop Weak Regionally restricted euxassay_007829_14
Specimen euxassay_007829_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_15 dorsal motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_007829_15
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007829_15
TS23: midgut loop Weak Regionally restricted euxassay_007829_15
Specimen euxassay_007829_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_16
TS23: ventral grey horn Weak Regionally restricted euxassay_007829_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_16
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007829_16
TS23: midgut loop Weak Regionally restricted euxassay_007829_16
Specimen euxassay_007829_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_007829_17 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_17 facial motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_007829_17
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_007829_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_17
Specimen euxassay_007829_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver right lobe Weak Regionally restricted euxassay_007829_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_007829_18 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007829_18 facial motor nucleus
TS23: cervical ganglion Weak Regionally restricted euxassay_007829_18
TS23: clavicle Weak Regionally restricted euxassay_007829_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_18
Specimen euxassay_007829_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Weak Regionally restricted euxassay_007829_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_007829_19
Specimen euxassay_007829_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Weak Regionally restricted euxassay_007829_20
Specimen euxassay_007829_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Weak Regionally restricted euxassay_007829_21
Specimen euxassay_007829_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Weak Regionally restricted euxassay_007829_22
Specimen euxassay_007829_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Regionally restricted euxassay_007829_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory