About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828137
Gene symbol: Slc22a4
Gene name: solute carrier family 22 (organic cation transporter), member 4
Probe: T56030
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex Moderate
TS23: corpus striatum Weak
TS23: hypothalamus Weak
TS23: thalamus Weak
TS23: midbrain Moderate
TS23: cerebellum Weak
TS23: medulla oblongata Moderate
TS23: pons Moderate
Specimen euxassay_019709_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_01
Specimen euxassay_019709_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_02
TS23: neural retina Strong Regionally restricted euxassay_019709_02
TS23: forebrain Moderate Regionally restricted euxassay_019709_02
Specimen euxassay_019709_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_03
TS23: neural retina Strong Regionally restricted euxassay_019709_03
TS23: forebrain Moderate Regionally restricted euxassay_019709_03
Specimen euxassay_019709_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_04
TS23: neural retina Strong Regionally restricted euxassay_019709_04
TS23: forebrain Moderate Regionally restricted euxassay_019709_04
Specimen euxassay_019709_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_05
TS23: facial ganglion Strong Regionally restricted euxassay_019709_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_05
TS23: neural retina Strong Regionally restricted euxassay_019709_05
TS23: forebrain Moderate Regionally restricted euxassay_019709_05
TS23: hindbrain Moderate Regionally restricted euxassay_019709_05
Specimen euxassay_019709_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_06
TS23: facial ganglion Strong Regionally restricted euxassay_019709_06
TS23: forebrain Moderate Regionally restricted euxassay_019709_06
TS23: hindbrain Moderate Regionally restricted euxassay_019709_06
Specimen euxassay_019709_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019709_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019709_07
TS23: facial ganglion Strong Regionally restricted euxassay_019709_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_07
TS23: forebrain Moderate Regionally restricted euxassay_019709_07
TS23: hindbrain Moderate Regionally restricted euxassay_019709_07
TS23: midbrain Moderate Regionally restricted euxassay_019709_07
Specimen euxassay_019709_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019709_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019709_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_08
TS23: forebrain Moderate Regionally restricted euxassay_019709_08
TS23: hindbrain Moderate Regionally restricted euxassay_019709_08
TS23: midbrain Moderate Regionally restricted euxassay_019709_08
Specimen euxassay_019709_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_09
TS23: vagus ganglion Strong Regionally restricted euxassay_019709_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019709_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_09
TS23: forebrain Moderate Regionally restricted euxassay_019709_09
TS23: hindbrain Moderate Regionally restricted euxassay_019709_09
TS23: midbrain Moderate Regionally restricted euxassay_019709_09
TS23: spinal cord Moderate Regionally restricted euxassay_019709_09
Specimen euxassay_019709_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_019709_10
TS23: cervical ganglion Moderate Regionally restricted euxassay_019709_10
TS23: forebrain Moderate Regionally restricted euxassay_019709_10
TS23: hindbrain Moderate Regionally restricted euxassay_019709_10
TS23: midbrain Moderate Regionally restricted euxassay_019709_10
TS23: spinal cord Moderate Regionally restricted euxassay_019709_10
Specimen euxassay_019709_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_019709_11
TS23: forebrain Moderate Regionally restricted euxassay_019709_11
TS23: hindbrain Moderate Regionally restricted euxassay_019709_11
TS23: midbrain Moderate Regionally restricted euxassay_019709_11
TS23: spinal cord Moderate Regionally restricted euxassay_019709_11
Specimen euxassay_019709_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_12
TS23: trigeminal nerve Strong Regionally restricted euxassay_019709_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_12
TS23: thoracic ganglion Moderate Regionally restricted euxassay_019709_12
TS23: forebrain Moderate Regionally restricted euxassay_019709_12
TS23: hindbrain Moderate Regionally restricted euxassay_019709_12
TS23: midbrain Moderate Regionally restricted euxassay_019709_12
TS23: spinal cord Moderate Regionally restricted euxassay_019709_12
TS23: axial skeleton Weak Regionally restricted euxassay_019709_12
Specimen euxassay_019709_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_019709_13
TS23: forebrain Moderate Regionally restricted euxassay_019709_13
TS23: hindbrain Moderate Regionally restricted euxassay_019709_13
TS23: midbrain Moderate Regionally restricted euxassay_019709_13
TS23: spinal cord Moderate Regionally restricted euxassay_019709_13
TS23: axial skeleton Weak Regionally restricted euxassay_019709_13
Specimen euxassay_019709_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_019709_14
TS23: forebrain Moderate Regionally restricted euxassay_019709_14
TS23: hindbrain Moderate Regionally restricted euxassay_019709_14
TS23: midbrain Moderate Regionally restricted euxassay_019709_14
TS23: spinal cord Moderate Regionally restricted euxassay_019709_14
TS23: axial skeleton Weak Regionally restricted euxassay_019709_14
Specimen euxassay_019709_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_15
TS23: vomeronasal organ Moderate Regionally restricted euxassay_019709_15
TS23: forebrain Moderate Regionally restricted euxassay_019709_15
TS23: hindbrain Moderate Regionally restricted euxassay_019709_15
TS23: midbrain Moderate Regionally restricted euxassay_019709_15
TS23: spinal cord Moderate Regionally restricted euxassay_019709_15
TS23: axial skeleton Weak Regionally restricted euxassay_019709_15
Specimen euxassay_019709_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_16
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019709_16
TS23: forebrain Moderate Regionally restricted euxassay_019709_16
TS23: hindbrain Moderate Regionally restricted euxassay_019709_16
TS23: midbrain Moderate Regionally restricted euxassay_019709_16
TS23: spinal cord Moderate Regionally restricted euxassay_019709_16
Specimen euxassay_019709_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_17
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019709_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_019709_17
TS23: forebrain Moderate Regionally restricted euxassay_019709_17
TS23: hindbrain Moderate Regionally restricted euxassay_019709_17
TS23: midbrain Moderate Regionally restricted euxassay_019709_17
Specimen euxassay_019709_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_18
TS23: vomeronasal organ Moderate Regionally restricted euxassay_019709_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_18
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019709_18
TS23: cervical ganglion Moderate Regionally restricted euxassay_019709_18
TS23: forebrain Moderate Regionally restricted euxassay_019709_18
TS23: hindbrain Moderate Regionally restricted euxassay_019709_18
TS23: midbrain Moderate Regionally restricted euxassay_019709_18
Specimen euxassay_019709_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_19
TS23: vagus ganglion Strong Regionally restricted euxassay_019709_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019709_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019709_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_19
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019709_19
TS23: forebrain Moderate Regionally restricted euxassay_019709_19
TS23: midbrain Moderate Regionally restricted euxassay_019709_19
TS23: hindbrain Moderate Regionally restricted euxassay_019709_19
Specimen euxassay_019709_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_20
TS23: trigeminal nerve Strong Regionally restricted euxassay_019709_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019709_20
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019709_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_20
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019709_20
TS23: forebrain Moderate Regionally restricted euxassay_019709_20
TS23: hindbrain Moderate Regionally restricted euxassay_019709_20
TS23: midbrain Moderate Regionally restricted euxassay_019709_20
Specimen euxassay_019709_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019709_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019709_21
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019709_21
TS23: forebrain Moderate Regionally restricted euxassay_019709_21
TS23: hindbrain Moderate Regionally restricted euxassay_019709_21
TS23: midbrain Moderate Regionally restricted euxassay_019709_21
Specimen euxassay_019709_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_22
TS23: facial ganglion Strong Regionally restricted euxassay_019709_22
TS23: olfactory epithelium Weak Regionally restricted euxassay_019709_22
TS23: forebrain Moderate Regionally restricted euxassay_019709_22
TS23: hindbrain Moderate Regionally restricted euxassay_019709_22
Specimen euxassay_019709_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_23
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_23
TS23: facial ganglion Strong Regionally restricted euxassay_019709_23
TS23: forebrain Moderate Regionally restricted euxassay_019709_23
TS23: hindbrain Moderate Regionally restricted euxassay_019709_23
Specimen euxassay_019709_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_019709_24
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019709_24
TS23: facial ganglion Strong Regionally restricted euxassay_019709_24
TS23: forebrain Moderate Regionally restricted euxassay_019709_24
TS23: hindbrain Moderate Regionally restricted euxassay_019709_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory