About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828132
Gene symbol: Slc22a13
Gene name: solute carrier family 22 (organic cation transporter), member 13
Probe: T1372
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex Moderate
TS23: cerebellum Weak
TS23: corpus striatum Weak
TS23: hypothalamus Weak
TS23: midbrain Weak
TS23: pons Weak
TS23: thalamus Weak
TS23: medulla oblongata Moderate
Specimen euxassay_007886_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_02
TS23: facial ganglion Strong Regionally restricted euxassay_007886_02
TS23: neural retina Moderate Regionally restricted euxassay_007886_02
Specimen euxassay_007886_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_03
TS23: facial ganglion Strong Regionally restricted euxassay_007886_03
TS23: neural retina Moderate Regionally restricted euxassay_007886_03
Specimen euxassay_007886_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_04
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_04
TS23: neural retina Moderate Regionally restricted euxassay_007886_04
Specimen euxassay_007886_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007886_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_05
Specimen euxassay_007886_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_06
TS23: vagus ganglion Strong Regionally restricted euxassay_007886_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007886_06 facial motor nucleus
Specimen euxassay_007886_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_007886_07 facial motor nucleus
Specimen euxassay_007886_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_08
Specimen euxassay_007886_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007886_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_09
Specimen euxassay_007886_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_12
Specimen euxassay_007886_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007886_13 facial motor nucleus
Specimen euxassay_007886_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007886_14 facial motor nucleus
Specimen euxassay_007886_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007886_15
TS23: vagus ganglion Moderate Regionally restricted euxassay_007886_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007886_15
Specimen euxassay_007886_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_16
TS23: facial ganglion Strong Regionally restricted euxassay_007886_16
Specimen euxassay_007886_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_17
Specimen euxassay_007886_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_18
Specimen euxassay_007886_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007886_19
Specimen euxassay_007886_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_007886_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory