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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828098
Gene symbol: Slc13a1
Gene name: solute carrier family 13 (sodium/sulfate symporters), member 1
Probe: MGC clone 58898
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003034_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_01
Specimen euxassay_003034_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_02
Specimen euxassay_003034_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_03
Specimen euxassay_003034_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_04
TS23: rib Strong Regionally restricted euxassay_003034_04
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_04
Specimen euxassay_003034_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_05
TS23: rib Strong Regionally restricted euxassay_003034_05
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_05
Specimen euxassay_003034_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003034_06
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_06
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_06
Specimen euxassay_003034_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_003034_07
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_07
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_07
Specimen euxassay_003034_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_08
TS23: rib Moderate Regionally restricted euxassay_003034_08
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_08
Specimen euxassay_003034_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_09
TS23: rib Moderate Regionally restricted euxassay_003034_09
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_09
Specimen euxassay_003034_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_10
TS23: rib Moderate Regionally restricted euxassay_003034_10
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_10
Specimen euxassay_003034_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_11
TS23: rib Moderate Regionally restricted euxassay_003034_11
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_11
Specimen euxassay_003034_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_12
TS23: renal calyx Moderate Regionally restricted euxassay_003034_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_12
Specimen euxassay_003034_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_003034_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_003034_13
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_13
Specimen euxassay_003034_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_14
TS23: esophagus Moderate Regionally restricted euxassay_003034_14
TS23: urethra Moderate Regionally restricted euxassay_003034_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_14
Specimen euxassay_003034_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_15
TS23: esophagus Moderate Regionally restricted euxassay_003034_15
TS23: urethra Moderate Regionally restricted euxassay_003034_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_15
Specimen euxassay_003034_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_16
TS23: esophagus Moderate Regionally restricted euxassay_003034_16
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_16
Specimen euxassay_003034_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_17
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_17
Specimen euxassay_003034_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_003034_18
TS23: renal calyx Moderate Regionally restricted euxassay_003034_18
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_18
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_18
Specimen euxassay_003034_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_19
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_19
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_19
Specimen euxassay_003034_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_20
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_20
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_003034_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_003034_20
Specimen euxassay_003034_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_21
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_21
Specimen euxassay_003034_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_22
TS23: rib Moderate Regionally restricted euxassay_003034_22
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_22
Specimen euxassay_003034_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Moderate Regionally restricted euxassay_003034_23
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_23
TS23: rib Moderate Regionally restricted euxassay_003034_23
TS23: 4th ventricle lateral recess Weak Regionally restricted euxassay_003034_23
Specimen euxassay_003034_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_003034_24
TS23: rib Moderate Regionally restricted euxassay_003034_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory