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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828082
Gene symbol: Six3os1
Gene name: SIX homeobox 3, opposite strand 1
Probe: T40369
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014141_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_05
Specimen euxassay_014141_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_06
Specimen euxassay_014141_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014141_07
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_07
Specimen euxassay_014141_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014141_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_08
Specimen euxassay_014141_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014141_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_09
TS23: pituitary gland Strong Regionally restricted euxassay_014141_09
Specimen euxassay_014141_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014141_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014141_10
TS23: anterior naris epithelium Strong Regionally restricted euxassay_014141_10
TS23: external naris epithelium Strong Regionally restricted euxassay_014141_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_10
TS23: pituitary gland Strong Regionally restricted euxassay_014141_10
Specimen euxassay_014141_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_014141_11
TS23: anterior naris epithelium Strong Regionally restricted euxassay_014141_11
TS23: external naris epithelium Strong Regionally restricted euxassay_014141_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_11
TS23: pituitary gland Strong Regionally restricted euxassay_014141_11
Specimen euxassay_014141_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_014141_12
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014141_12
TS23: external naris epithelium Moderate Regionally restricted euxassay_014141_12
TS23: pituitary gland Strong Regionally restricted euxassay_014141_12
Specimen euxassay_014141_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_014141_13
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014141_13
TS23: external naris epithelium Moderate Regionally restricted euxassay_014141_13
TS23: pituitary gland Strong Regionally restricted euxassay_014141_13
Specimen euxassay_014141_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_014141_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014141_14
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014141_14
TS23: external naris epithelium Moderate Regionally restricted euxassay_014141_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_14
Specimen euxassay_014141_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014141_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_15
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_014141_15
TS23: external naris epithelium Moderate Regionally restricted euxassay_014141_15
Specimen euxassay_014141_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014141_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_16
Specimen euxassay_014141_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_014141_17
Specimen euxassay_014141_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014141_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014141_18
Specimen euxassay_014141_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014141_19
Specimen euxassay_014141_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014141_20
Specimen euxassay_014141_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014141_21
Specimen euxassay_014141_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014141_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory