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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828059
Gene symbol: Shisa6
Gene name: shisa family member 6
Probe: T39803
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_016089_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_016089_05
TS23: facial ganglion Moderate Regionally restricted euxassay_016089_05
Specimen euxassay_016089_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_016089_06
TS23: facial ganglion Moderate Regionally restricted euxassay_016089_06
Specimen euxassay_016089_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_016089_07
Specimen euxassay_016089_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_016089_08 trigeminal motor nucleus
Specimen euxassay_016089_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016089_09
Specimen euxassay_016089_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016089_10
Specimen euxassay_016089_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016089_11
TS23: spinal cord floor plate Weak Regionally restricted euxassay_016089_11
TS23: spinal cord roof plate Weak Regionally restricted euxassay_016089_11
Specimen euxassay_016089_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_016089_12
TS23: spinal cord roof plate Weak Regionally restricted euxassay_016089_12
Specimen euxassay_016089_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord roof plate Weak Regionally restricted euxassay_016089_13
TS23: spinal cord floor plate Weak Regionally restricted euxassay_016089_13
TS23: metencephalon roof Weak Regionally restricted euxassay_016089_13
Specimen euxassay_016089_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord roof plate Weak Regionally restricted euxassay_016089_14
TS23: spinal cord floor plate Weak Regionally restricted euxassay_016089_14
TS23: metencephalon roof Weak Regionally restricted euxassay_016089_14
Specimen euxassay_016089_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Regionally restricted euxassay_016089_16 trigeminal motor nucleus
TS23: spinal cord roof plate Weak Regionally restricted euxassay_016089_16
TS23: spinal cord floor plate Weak Regionally restricted euxassay_016089_16
Specimen euxassay_016089_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Regionally restricted euxassay_016089_17 trigeminal motor nucleus
TS23: spinal cord roof plate Weak Regionally restricted euxassay_016089_17
Specimen euxassay_016089_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016089_18
TS23: pons mantle layer Weak Regionally restricted euxassay_016089_18 trigeminal motor nucleus
Specimen euxassay_016089_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_016089_19
Specimen euxassay_016089_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Weak Regionally restricted euxassay_016089_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
MGI 6.23 		The Jackson Laboratory