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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828014
Gene symbol: Scaf11
Gene name: SR-related CTD-associated factor 11
Probe: T40252
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014100_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_01
Specimen euxassay_014100_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_02
Specimen euxassay_014100_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_014100_03
Specimen euxassay_014100_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_04
Specimen euxassay_014100_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_05
Specimen euxassay_014100_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_06
Specimen euxassay_014100_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_07
TS23: heart ventricle Moderate Spotted euxassay_014100_07
Specimen euxassay_014100_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_08
TS23: heart ventricle Moderate Spotted euxassay_014100_08
Specimen euxassay_014100_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_09
TS23: heart ventricle Moderate Spotted euxassay_014100_09
Specimen euxassay_014100_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_10
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_014100_10
Specimen euxassay_014100_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_014100_11
TS23: heart ventricle Moderate Spotted euxassay_014100_11
Specimen euxassay_014100_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_12
TS23: heart ventricle Moderate Spotted euxassay_014100_12
Specimen euxassay_014100_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_13
Specimen euxassay_014100_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_14
Specimen euxassay_014100_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014100_15
Specimen euxassay_014100_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_16
TS23: heart ventricle Moderate Spotted euxassay_014100_16
Specimen euxassay_014100_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_17
Specimen euxassay_014100_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_18
Specimen euxassay_014100_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_19
Specimen euxassay_014100_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_20
Specimen euxassay_014100_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_21
Specimen euxassay_014100_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_014100_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory