About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828010
Gene symbol: Sfi1
Gene name: Sfi1 homolog, spindle assembly associated (yeast)
Probe: MGC clone 54840
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000826_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Strong Regionally restricted euxassay_000826_01 perichondrium
TS23: dermis Moderate Uniform euxassay_000826_01
TS23: liver Strong Regionally restricted euxassay_000826_01 peritoneum
Specimen euxassay_000826_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Strong Regionally restricted euxassay_000826_02
TS23: liver Strong Regionally restricted euxassay_000826_02 peritoneum
TS23: stomach Strong Regionally restricted euxassay_000826_02 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_02
TS23: dermis Moderate Uniform euxassay_000826_02
TS23: perioptic mesenchyme Moderate Uniform euxassay_000826_02
Specimen euxassay_000826_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dermis Moderate Uniform euxassay_000826_03
TS23: limb Strong Regionally restricted euxassay_000826_03 perichondrium
TS23: perioptic mesenchyme Moderate Uniform euxassay_000826_03
TS23: stomach Strong Regionally restricted euxassay_000826_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_03
Specimen euxassay_000826_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Strong Regionally restricted euxassay_000826_04
TS23: stomach Strong Regionally restricted euxassay_000826_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_04
TS23: perioptic mesenchyme Moderate Uniform euxassay_000826_04
TS23: dermis Moderate Uniform euxassay_000826_04
Specimen euxassay_000826_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Strong Regionally restricted euxassay_000826_05 perichondrium
TS23: perioptic mesenchyme Moderate Uniform euxassay_000826_05
TS23: skeleton Strong Regionally restricted euxassay_000826_05 perichondrium
TS23: stomach Strong Regionally restricted euxassay_000826_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_05
TS23: left lung lobar bronchus mesenchyme Strong Regionally restricted euxassay_000826_05
Specimen euxassay_000826_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dermis Moderate Uniform euxassay_000826_06
TS23: stomach Strong Regionally restricted euxassay_000826_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_06
TS23: left lung mesenchyme Strong Regionally restricted euxassay_000826_06
TS23: cranium Strong Regionally restricted euxassay_000826_06 perichondrium
TS23: axial skeleton Strong Regionally restricted euxassay_000826_06 perichondrium
TS23: left lung lobar bronchus mesenchyme Strong Regionally restricted euxassay_000826_06
Specimen euxassay_000826_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_000826_07 perichondrium
TS23: cranium Strong Regionally restricted euxassay_000826_07 perichondrium
TS23: limb Strong Regionally restricted euxassay_000826_07 perichondrium
TS23: stomach Strong Regionally restricted euxassay_000826_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_07
TS23: left lung lobar bronchus mesenchyme Strong Regionally restricted euxassay_000826_07
TS23: visceral pericardium Strong Uniform euxassay_000826_07
Specimen euxassay_000826_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dermis Moderate Uniform euxassay_000826_08
TS23: stomach Strong Regionally restricted euxassay_000826_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_08
TS23: mesenchyme of metanephros Weak Uniform euxassay_000826_08
TS23: left lung lobar bronchus mesenchyme Strong Regionally restricted euxassay_000826_08
TS23: visceral pericardium Strong Uniform euxassay_000826_08
Specimen euxassay_000826_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung mesenchyme Strong Regionally restricted euxassay_000826_09
TS23: stomach Strong Regionally restricted euxassay_000826_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_09
TS23: mesenchyme of metanephros Weak Uniform euxassay_000826_09
TS23: axial skeleton Strong Regionally restricted euxassay_000826_09 perichondrium
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_09 perichondrium
TS23: palatal shelf mesenchyme Moderate Regionally restricted euxassay_000826_09
TS23: visceral pericardium Strong Uniform euxassay_000826_09
Specimen euxassay_000826_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_000826_10 perichondrium
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_10 perichondrium
TS23: axial skeleton Strong Regionally restricted euxassay_000826_10 perichondrium
TS23: left lung mesenchyme Strong Regionally restricted euxassay_000826_10
TS23: mesenchyme of metanephros Weak Uniform euxassay_000826_10
TS23: palatal shelf mesenchyme Strong Regionally restricted euxassay_000826_10
TS23: stomach Strong Regionally restricted euxassay_000826_10 smooth muscle
TS23: gastro-esophageal junction mesenchyme Strong Regionally restricted euxassay_000826_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_10
TS23: visceral pericardium Strong Uniform euxassay_000826_10
Specimen euxassay_000826_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: gastro-esophageal junction mesenchyme Strong Regionally restricted euxassay_000826_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_11
TS23: stomach Strong Regionally restricted euxassay_000826_11 smooth muscle
TS23: left lung mesenchyme Strong Regionally restricted euxassay_000826_11
TS23: left lung lobar bronchus mesenchyme Strong Regionally restricted euxassay_000826_11
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_11 perichondrium
TS23: visceral pericardium Strong Uniform euxassay_000826_11
Specimen euxassay_000826_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: gastro-esophageal junction mesenchyme Strong Regionally restricted euxassay_000826_12 smooth muscle
TS23: esophagus mesenchyme Strong Regionally restricted euxassay_000826_12 smooth muscle
TS23: stomach Strong Regionally restricted euxassay_000826_12 smooth muscle
TS23: foregut duodenum Strong Regionally restricted euxassay_000826_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_12
TS23: axial skeleton Strong Regionally restricted euxassay_000826_12 perichondrium
TS23: left lung lobar bronchus mesenchyme Strong Regionally restricted euxassay_000826_12
TS23: left lung mesenchyme Strong Regionally restricted euxassay_000826_12
TS23: main bronchus cartilage Strong Regionally restricted euxassay_000826_12
TS23: visceral pericardium Strong Uniform euxassay_000826_12
Specimen euxassay_000826_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: main bronchus cartilage Strong Regionally restricted euxassay_000826_13
TS23: trachea cartilaginous ring Strong Regionally restricted euxassay_000826_13
TS23: esophagus mesenchyme Strong Regionally restricted euxassay_000826_13 smooth muscle
TS23: gut Moderate Regionally restricted euxassay_000826_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_13
TS23: axial skeleton Strong Regionally restricted euxassay_000826_13 perichondrium
TS23: visceral pericardium Strong Uniform euxassay_000826_13
Specimen euxassay_000826_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_000826_14 perichondrium
TS23: trachea mesenchyme Moderate Regionally restricted euxassay_000826_14
TS23: detrusor muscle of bladder Moderate Uniform euxassay_000826_14
TS23: gut Strong Regionally restricted euxassay_000826_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_14
TS23: dermis Moderate Regionally restricted euxassay_000826_14
TS23: right lung caudal lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_14
TS23: right lung cranial lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_14
TS23: right lung mesenchyme Moderate Regionally restricted euxassay_000826_14
TS23: visceral pericardium Strong Uniform euxassay_000826_14
Specimen euxassay_000826_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial skeleton Moderate Regionally restricted euxassay_000826_15
TS23: main bronchus mesenchyme Moderate Regionally restricted euxassay_000826_15
TS23: right lung cranial lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_15
TS23: right lung caudal lobe lobar bronchus epithelium Moderate Regionally restricted euxassay_000826_15
TS23: right lung mesenchyme Moderate Regionally restricted euxassay_000826_15
TS23: detrusor muscle of bladder Moderate Uniform euxassay_000826_15
TS23: gut Strong Regionally restricted euxassay_000826_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_15
TS23: visceral pericardium Strong Uniform euxassay_000826_15
Specimen euxassay_000826_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: detrusor muscle of bladder Moderate Uniform euxassay_000826_16
TS23: right lung mesenchyme Moderate Regionally restricted euxassay_000826_16
TS23: right lung caudal lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_16
TS23: right lung cranial lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_16
TS23: palatal shelf mesenchyme Strong Regionally restricted euxassay_000826_16
TS23: gut Moderate Regionally restricted euxassay_000826_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_16
TS23: axial skeleton Strong Regionally restricted euxassay_000826_16 perichondrium
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_16 perichondrium
TS23: visceral pericardium Strong Uniform euxassay_000826_16
Specimen euxassay_000826_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_17 perichondrium
TS23: axial skeleton Strong Regionally restricted euxassay_000826_17 perichondrium
TS23: right lung cranial lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_17
TS23: right lung caudal lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_17
TS23: right lung mesenchyme Moderate Regionally restricted euxassay_000826_17
TS23: detrusor muscle of bladder Moderate Uniform euxassay_000826_17
TS23: gut Moderate Regionally restricted euxassay_000826_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_17
TS23: visceral pericardium Strong Uniform euxassay_000826_17
Specimen euxassay_000826_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: gut Moderate Regionally restricted euxassay_000826_18 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_18
TS23: right lung caudal lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_18
TS23: right lung cranial lobe lobar bronchus mesenchyme Moderate Regionally restricted euxassay_000826_18
TS23: right lung mesenchyme Moderate Regionally restricted euxassay_000826_18
TS23: axial skeleton Strong Regionally restricted euxassay_000826_18 perichondrium
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_18 perichondrium
TS23: mesenchyme of metanephros Weak Uniform euxassay_000826_18
TS23: visceral pericardium Strong Uniform euxassay_000826_18
Specimen euxassay_000826_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: gut Moderate Regionally restricted euxassay_000826_19 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_19
TS23: mesenchyme of metanephros Weak Uniform euxassay_000826_19
TS23: thoracic segment skeleton Strong Regionally restricted euxassay_000826_19 perichondrium
TS23: cranium Strong Regionally restricted euxassay_000826_19 perichondrium
Specimen euxassay_000826_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: gut Moderate Regionally restricted euxassay_000826_20 smooth muscle
TS23: smooth muscle tissue Present euxassay_000826_20
TS23: mesenchyme of metanephros Weak Uniform euxassay_000826_20
Specimen euxassay_000826_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_000826_22 perichondrium
Specimen euxassay_000826_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: skeleton Moderate Regionally restricted euxassay_000826_23 perichondrium
Specimen euxassay_000826_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_000826_24 perichondrium
TS23: skeleton Moderate Regionally restricted euxassay_000826_24 perichondrium
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory