About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827937
Gene symbol: Sec61a1
Gene name: SEC61 translocon subunit alpha 1
Probe: MGC clone 5676
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004866_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_01
Specimen euxassay_004866_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_02
Specimen euxassay_004866_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_03
Specimen euxassay_004866_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_04
TS23: mandible Moderate Regionally restricted euxassay_004866_04
Specimen euxassay_004866_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_05
TS23: mandible Moderate Regionally restricted euxassay_004866_05
TS23: rib Strong Regionally restricted euxassay_004866_05 periosteum
Specimen euxassay_004866_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004866_06
TS23: maxilla Moderate Regionally restricted euxassay_004866_06
TS23: rib Strong Regionally restricted euxassay_004866_06 periosteum
TS23: vibrissa Moderate Regionally restricted euxassay_004866_06
Specimen euxassay_004866_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004866_07
TS23: maxilla Moderate Regionally restricted euxassay_004866_07
TS23: rib Strong Regionally restricted euxassay_004866_07 periosteum
TS23: vibrissa Moderate Regionally restricted euxassay_004866_07
Specimen euxassay_004866_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004866_08
TS23: maxilla Moderate Regionally restricted euxassay_004866_08
TS23: rib Strong Regionally restricted euxassay_004866_08 periosteum
TS23: vibrissa Moderate Regionally restricted euxassay_004866_08
Specimen euxassay_004866_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_004866_09
TS23: mandible Strong Regionally restricted euxassay_004866_09
TS23: rib Strong Regionally restricted euxassay_004866_09 periosteum
Specimen euxassay_004866_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_004866_10
TS23: mandible Strong Regionally restricted euxassay_004866_10
TS23: rib Strong Regionally restricted euxassay_004866_10 periosteum
Specimen euxassay_004866_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_004866_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_004866_11
TS23: rib Strong Regionally restricted euxassay_004866_11 periosteum
Specimen euxassay_004866_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_004866_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_004866_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_004866_12
TS23: rib Strong Regionally restricted euxassay_004866_12 periosteum
TS23: clavicle Moderate Regionally restricted euxassay_004866_12
Specimen euxassay_004866_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_004866_13
TS23: clavicle Moderate Regionally restricted euxassay_004866_13
Specimen euxassay_004866_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Strong Regionally restricted euxassay_004866_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_004866_15
Specimen euxassay_004866_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_004866_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_004866_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_004866_16
TS23: mandible Strong Regionally restricted euxassay_004866_16
Specimen euxassay_004866_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_004866_17
TS23: mandible Strong Regionally restricted euxassay_004866_17
TS23: lower jaw incisor Strong Regionally restricted euxassay_004866_17
Specimen euxassay_004866_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_004866_18
TS23: mandible Strong Regionally restricted euxassay_004866_18
Specimen euxassay_004866_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_004866_19
TS23: maxilla Strong Regionally restricted euxassay_004866_19
TS23: clavicle Moderate Regionally restricted euxassay_004866_19
Specimen euxassay_004866_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_004866_20
TS23: maxilla Moderate Regionally restricted euxassay_004866_20
TS23: vibrissa Moderate Regionally restricted euxassay_004866_20
TS23: clavicle Moderate Regionally restricted euxassay_004866_20
Specimen euxassay_004866_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_21
TS23: mandible Moderate Regionally restricted euxassay_004866_21
TS23: maxilla Moderate Regionally restricted euxassay_004866_21
Specimen euxassay_004866_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_22
TS23: mandible Moderate Regionally restricted euxassay_004866_22
Specimen euxassay_004866_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_23
TS23: mandible Moderate Regionally restricted euxassay_004866_23
TS23: maxilla Moderate Regionally restricted euxassay_004866_23
TS23: rib Strong Regionally restricted euxassay_004866_23 periosteum
Specimen euxassay_004866_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cranium Strong Regionally restricted euxassay_004866_24
TS23: mandible Moderate Regionally restricted euxassay_004866_24
TS23: rib Strong Regionally restricted euxassay_004866_24 periosteum
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory