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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827929
Gene symbol: Sec11a
Gene name: SEC11 homolog A, signal peptidase complex subunit
Probe: MGC clone 5679
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003417_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_01
TS23: basisphenoid bone Moderate Regionally restricted euxassay_003417_01
Specimen euxassay_003417_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: basisphenoid bone Moderate Regionally restricted euxassay_003417_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_02
Specimen euxassay_003417_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_03
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_03
Specimen euxassay_003417_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_04
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_04
Specimen euxassay_003417_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_05
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_05
Specimen euxassay_003417_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_003417_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_06
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_06
Specimen euxassay_003417_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_07
TS23: vibrissa Moderate Regionally restricted euxassay_003417_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_07
TS23: testis Moderate Regionally restricted euxassay_003417_07
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003417_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_07
Specimen euxassay_003417_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_08
TS23: vibrissa Moderate Regionally restricted euxassay_003417_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_08
TS23: testis Moderate Regionally restricted euxassay_003417_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_003417_08 trigeminal motor nucleus
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_08
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003417_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_08
Specimen euxassay_003417_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_09
TS23: vibrissa Moderate Regionally restricted euxassay_003417_09
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_09
TS23: testis Moderate Regionally restricted euxassay_003417_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_003417_09 facial motor nucleus and inferior olivary nucleus
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_09
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_09
TS23: vagus ganglion Weak Regionally restricted euxassay_003417_09
Specimen euxassay_003417_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_10
TS23: renal calyx Weak Regionally restricted euxassay_003417_10
TS23: testis Moderate Regionally restricted euxassay_003417_10
TS23: clavicle Moderate Regionally restricted euxassay_003417_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_003417_10 facial motor nucleus
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003417_10
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_10
TS23: cervical ganglion Weak Regionally restricted euxassay_003417_10
Specimen euxassay_003417_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_11
TS23: renal calyx Weak Regionally restricted euxassay_003417_11
TS23: clavicle Moderate Regionally restricted euxassay_003417_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_11
TS23: pancreas Moderate Regionally restricted euxassay_003417_11
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003417_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_003417_11
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_003417_11
Specimen euxassay_003417_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Weak Regionally restricted euxassay_003417_12
TS23: clavicle Moderate Regionally restricted euxassay_003417_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_12
TS23: pancreas Moderate Regionally restricted euxassay_003417_12
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_003417_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_003417_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_003417_12
Specimen euxassay_003417_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal calyx Weak Regionally restricted euxassay_003417_13
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003417_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_13
TS23: pancreas Moderate Regionally restricted euxassay_003417_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_003417_13
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003417_13
TS23: ventral grey horn Weak Regionally restricted euxassay_003417_13
Specimen euxassay_003417_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003417_14
TS23: pancreas Moderate Regionally restricted euxassay_003417_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_003417_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003417_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_003417_14
Specimen euxassay_003417_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003417_15
TS23: ventral grey horn Weak Regionally restricted euxassay_003417_15
TS23: thoracic ganglion Weak Regionally restricted euxassay_003417_15
Specimen euxassay_003417_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_003417_16 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_003417_16
TS23: thoracic ganglion Weak Regionally restricted euxassay_003417_16
Specimen euxassay_003417_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_17
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003417_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_003417_17 facial motor nucleus and inferior olivary nucleus
TS23: upper jaw incisor Weak Regionally restricted euxassay_003417_17
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_003417_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_17
Specimen euxassay_003417_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_18
TS23: clavicle Moderate Regionally restricted euxassay_003417_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_18
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003417_18
TS23: pancreas Moderate Regionally restricted euxassay_003417_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_003417_18 trigeminal motor nucleus
TS23: upper jaw incisor Weak Regionally restricted euxassay_003417_18
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003417_18
TS23: ventral grey horn Weak Regionally restricted euxassay_003417_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_18
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_003417_18
TS23: cervical ganglion Weak Regionally restricted euxassay_003417_18
Specimen euxassay_003417_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_19
TS23: clavicle Moderate Regionally restricted euxassay_003417_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_19
TS23: upper jaw incisor Weak Regionally restricted euxassay_003417_19
TS23: lower jaw incisor Weak Regionally restricted euxassay_003417_19
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003417_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_19
TS23: vagus ganglion Weak Regionally restricted euxassay_003417_19
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003417_19
Specimen euxassay_003417_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_20
TS23: renal calyx Weak Regionally restricted euxassay_003417_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003417_20
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_20
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003417_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_20
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_003417_20
Specimen euxassay_003417_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003417_21
TS23: vibrissa Moderate Regionally restricted euxassay_003417_21
TS23: renal calyx Weak Regionally restricted euxassay_003417_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_21
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_21
Specimen euxassay_003417_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_003417_22
TS23: renal calyx Moderate Regionally restricted euxassay_003417_22
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_22
TS23: testis Moderate Regionally restricted euxassay_003417_22
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_003417_22
Specimen euxassay_003417_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_003417_23
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003417_23
TS23: testis Moderate Regionally restricted euxassay_003417_23
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003417_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory