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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827923
Gene symbol: Sdf2l1
Gene name: stromal cell-derived factor 2-like 1
Probe: MGC clone 59469
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004189_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_04
Specimen euxassay_004189_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_05
Specimen euxassay_004189_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_06
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004189_06
Specimen euxassay_004189_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_07
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004189_07
Specimen euxassay_004189_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_08
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004189_08
Specimen euxassay_004189_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_09
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004189_09
Specimen euxassay_004189_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_10
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004189_10
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_10
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004189_10
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_10
Specimen euxassay_004189_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_11
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004189_11
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_11
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_11
TS23: rest of cerebellum ventricular layer Moderate Uniform euxassay_004189_11
TS23: pons ventricular layer Moderate Uniform euxassay_004189_11
Specimen euxassay_004189_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004189_12
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004189_12
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_12
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_12
TS23: pons ventricular layer Moderate Uniform euxassay_004189_12
TS23: spinal cord ventricular layer Moderate Uniform euxassay_004189_12
Specimen euxassay_004189_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004189_13
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004189_13
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_13
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_13
TS23: pons ventricular layer Moderate Uniform euxassay_004189_13
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_13
TS23: spinal cord ventricular layer Moderate Uniform euxassay_004189_13
Specimen euxassay_004189_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_14
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004189_14
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_004189_14
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004189_14
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_14
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_14
TS23: pons ventricular layer Moderate Uniform euxassay_004189_14
TS23: spinal cord ventricular layer Moderate Uniform euxassay_004189_14
Specimen euxassay_004189_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_004189_15
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_15
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_004189_15
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_15
TS23: pons ventricular layer Moderate Uniform euxassay_004189_15
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_15
Specimen euxassay_004189_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_16
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_16
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_16
TS23: pons ventricular layer Moderate Uniform euxassay_004189_16
Specimen euxassay_004189_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_17
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_17
TS23: pons ventricular layer Moderate Uniform euxassay_004189_17
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_17
Specimen euxassay_004189_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_18
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_18
TS23: pons ventricular layer Moderate Uniform euxassay_004189_18
TS23: medulla oblongata basal plate ventricular layer Moderate Uniform euxassay_004189_18
Specimen euxassay_004189_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_19
TS23: midbrain ventricular layer Moderate Uniform euxassay_004189_19
TS23: pons ventricular layer Moderate Uniform euxassay_004189_19
Specimen euxassay_004189_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_004189_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory