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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827910
Gene symbol: Scrg1
Gene name: scrapie responsive gene 1
Probe: MGC clone 67121
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007430_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_02
TS23: temporal bone Weak Regionally restricted euxassay_007430_02
Specimen euxassay_007430_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_03
TS23: temporal bone Weak Regionally restricted euxassay_007430_03
Specimen euxassay_007430_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_007430_04
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_007430_04
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_007430_04
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_007430_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_04
TS23: temporal bone Moderate Regionally restricted euxassay_007430_04
Specimen euxassay_007430_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_007430_05
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_007430_05
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_007430_05
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_007430_05
TS23: left lung Moderate Spotted euxassay_007430_05
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_05
TS23: temporal bone Moderate Regionally restricted euxassay_007430_05
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_05
Specimen euxassay_007430_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_007430_06
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_007430_06
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_007430_06
TS23: left lung Strong Spotted euxassay_007430_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_06
TS23: temporal bone Moderate Regionally restricted euxassay_007430_06
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_06
Specimen euxassay_007430_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_007430_07
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_007430_07
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_007430_07
TS23: left lung Strong Spotted euxassay_007430_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_07
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_07
Specimen euxassay_007430_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Spotted euxassay_007430_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007430_08
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_08
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007430_08
Specimen euxassay_007430_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Spotted euxassay_007430_09
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007430_09
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_09
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007430_09
Specimen euxassay_007430_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Spotted euxassay_007430_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007430_10
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_10
Specimen euxassay_007430_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Spotted euxassay_007430_11
TS23: nasal septum Strong Regionally restricted euxassay_007430_11
Specimen euxassay_007430_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Spotted euxassay_007430_12
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_007430_12
TS23: nasal septum Strong Regionally restricted euxassay_007430_12
Specimen euxassay_007430_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Spotted euxassay_007430_13
TS23: axial skeleton tail region Strong Regionally restricted euxassay_007430_13
TS23: nasal septum Strong Regionally restricted euxassay_007430_13
Specimen euxassay_007430_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_007430_14
TS23: esophagus Moderate Regionally restricted euxassay_007430_14
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_007430_14
TS23: nasal septum Strong Regionally restricted euxassay_007430_14
TS23: sternum Strong Regionally restricted euxassay_007430_14
Specimen euxassay_007430_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_007430_15
TS23: esophagus Moderate Regionally restricted euxassay_007430_15
TS23: nasal septum Strong Regionally restricted euxassay_007430_15
TS23: sternum Strong Regionally restricted euxassay_007430_15
Specimen euxassay_007430_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_007430_16
TS23: nasal septum Strong Regionally restricted euxassay_007430_16
Specimen euxassay_007430_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_007430_17
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_007430_17
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_007430_17
TS23: right lung Strong Spotted euxassay_007430_17
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_17
Specimen euxassay_007430_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_007430_18
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_007430_18
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_007430_18
TS23: right lung Strong Spotted euxassay_007430_18
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007430_18
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_18
Specimen euxassay_007430_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_007430_19
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_007430_19
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_007430_19
TS23: right lung Moderate Spotted euxassay_007430_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_007430_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_19
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_19
Specimen euxassay_007430_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_007430_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_20
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_20
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007430_20
Specimen euxassay_007430_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 metatarsal Strong Regionally restricted euxassay_007430_21
TS23: hindlimb digit 2 metatarsal Strong Regionally restricted euxassay_007430_21
TS23: hindlimb digit 3 metatarsal Strong Regionally restricted euxassay_007430_21
TS23: hindlimb digit 4 metatarsal Strong Regionally restricted euxassay_007430_21
TS23: right lung Strong Spotted euxassay_007430_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_21
TS23: temporal bone Moderate Regionally restricted euxassay_007430_21
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_007430_21
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_21
Specimen euxassay_007430_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 metatarsal Strong Regionally restricted euxassay_007430_22
TS23: hindlimb digit 3 metatarsal Strong Regionally restricted euxassay_007430_22
TS23: right lung Strong Spotted euxassay_007430_22
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_22
TS23: temporal bone Moderate Regionally restricted euxassay_007430_22
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_22
Specimen euxassay_007430_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_007430_23
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_23
TS23: temporal bone Moderate Regionally restricted euxassay_007430_23
TS23: trigeminal ganglion Moderate Single cells euxassay_007430_23
Specimen euxassay_007430_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Spotted euxassay_007430_24
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_007430_24
TS23: temporal bone Moderate Regionally restricted euxassay_007430_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory