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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827836
Gene symbol: Runx1t1
Gene name: RUNX1 translocation partner 1
Probe: T45052
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_016597_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016597_07
Specimen euxassay_016597_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016597_08
Specimen euxassay_016597_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016597_09
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016597_09
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016597_09
Specimen euxassay_016597_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016597_10
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016597_10
TS23: dorsal grey horn Weak Regionally restricted euxassay_016597_10
Specimen euxassay_016597_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016597_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016597_11
TS23: dorsal grey horn Weak Regionally restricted euxassay_016597_11
Specimen euxassay_016597_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_016597_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_016597_12
TS23: dorsal grey horn Weak Regionally restricted euxassay_016597_12
Specimen euxassay_016597_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Weak Regionally restricted euxassay_016597_13
Specimen euxassay_016597_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016597_14
TS23: dorsal grey horn Weak Regionally restricted euxassay_016597_14
Specimen euxassay_016597_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016597_15
Specimen euxassay_016597_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_016597_16
Specimen euxassay_016597_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016597_17
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_016597_17
Specimen euxassay_016597_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016597_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_016597_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016597_18
Specimen euxassay_016597_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Weak Regionally restricted euxassay_016597_19
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_016597_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory