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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827830
Gene symbol: Rtn4
Gene name: reticulon 4
Probe: MGC clone 38204
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004344_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_01
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_01
TS23: neural retina Strong Regionally restricted euxassay_004344_01
Specimen euxassay_004344_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_02
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_02
TS23: neural retina Strong Regionally restricted euxassay_004344_02
Specimen euxassay_004344_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_03
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_03
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004344_03
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004344_03
TS23: neural retina Strong Regionally restricted euxassay_004344_03
Specimen euxassay_004344_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_04
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_04
TS23: facial ganglion Strong Regionally restricted euxassay_004344_04
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004344_04
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004344_04
Specimen euxassay_004344_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_05
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_05
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004344_05
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004344_05
Specimen euxassay_004344_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_06
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_06
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004344_06
Specimen euxassay_004344_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_07
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004344_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004344_07
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004344_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_07
Specimen euxassay_004344_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_08
TS23: vagus ganglion Strong Regionally restricted euxassay_004344_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004344_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_08
Specimen euxassay_004344_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_09
Specimen euxassay_004344_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_10
Specimen euxassay_004344_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_11
Specimen euxassay_004344_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_12
Specimen euxassay_004344_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_14
Specimen euxassay_004344_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_15
Specimen euxassay_004344_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_16
Specimen euxassay_004344_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004344_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_004344_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_17
Specimen euxassay_004344_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004344_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004344_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_18
Specimen euxassay_004344_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004344_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004344_19
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004344_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004344_19
Specimen euxassay_004344_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_20
TS23: facial ganglion Strong Regionally restricted euxassay_004344_20
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004344_20
Specimen euxassay_004344_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_21
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_21
TS23: facial ganglion Strong Regionally restricted euxassay_004344_21
Specimen euxassay_004344_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_22
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004344_22
TS23: facial ganglion Strong Regionally restricted euxassay_004344_22
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004344_22
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004344_22
TS23: neural retina Strong Regionally restricted euxassay_004344_22
Specimen euxassay_004344_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_23
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_23
TS23: upper arm mesenchyme Moderate Regionally restricted euxassay_004344_23
TS23: shoulder mesenchyme Moderate Regionally restricted euxassay_004344_23
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004344_23
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004344_23
TS23: neural retina Strong Regionally restricted euxassay_004344_23
Specimen euxassay_004344_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_004344_24
TS23: head mesenchyme Moderate Regionally restricted euxassay_004344_24
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004344_24
TS23: upper arm mesenchyme Moderate Regionally restricted euxassay_004344_24
TS23: neural retina Strong Regionally restricted euxassay_004344_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory