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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827828
Gene symbol: Rtn1
Gene name: reticulon 1
Probe: MGC clone 56910
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003752_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Uniform euxassay_003752_01
TS23: neural retina Strong Regionally restricted euxassay_003752_01
Specimen euxassay_003752_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: brain Strong Uniform euxassay_003752_02
TS23: stomach Weak Regionally restricted euxassay_003752_02 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_02
TS23: neural retina Strong Regionally restricted euxassay_003752_02
Specimen euxassay_003752_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_03
TS23: facial ganglion Strong Regionally restricted euxassay_003752_03
TS23: brain Strong Uniform euxassay_003752_03
TS23: stomach Weak Regionally restricted euxassay_003752_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_03
TS23: neural retina Strong Regionally restricted euxassay_003752_03
Specimen euxassay_003752_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_04
TS23: facial ganglion Strong Regionally restricted euxassay_003752_04
TS23: brain Strong Uniform euxassay_003752_04
TS23: stomach Moderate Regionally restricted euxassay_003752_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_04
TS23: neural retina Strong Regionally restricted euxassay_003752_04
Specimen euxassay_003752_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_05
TS23: brain Strong Uniform euxassay_003752_05
TS23: stomach Moderate Regionally restricted euxassay_003752_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_05
Specimen euxassay_003752_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003752_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003752_06
TS23: facial ganglion Strong Regionally restricted euxassay_003752_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_06
TS23: brain Strong Uniform euxassay_003752_06
TS23: stomach Moderate Regionally restricted euxassay_003752_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_06
Specimen euxassay_003752_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003752_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_07
TS23: vagus ganglion Strong Regionally restricted euxassay_003752_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_07
TS23: brain Strong Uniform euxassay_003752_07
TS23: spinal cord Strong Uniform euxassay_003752_07
TS23: stomach Moderate Regionally restricted euxassay_003752_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_07
Specimen euxassay_003752_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003752_08
TS23: vagus ganglion Strong Regionally restricted euxassay_003752_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_08
TS23: brain Strong Uniform euxassay_003752_08
TS23: spinal cord Strong Uniform euxassay_003752_08
TS23: stomach Moderate Regionally restricted euxassay_003752_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_08
Specimen euxassay_003752_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003752_09
TS23: brain Strong Uniform euxassay_003752_09
TS23: spinal cord Strong Uniform euxassay_003752_09
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_003752_09
TS23: stomach Moderate Regionally restricted euxassay_003752_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_003752_09
Specimen euxassay_003752_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_10
TS23: brain Strong Uniform euxassay_003752_10
TS23: spinal cord Strong Uniform euxassay_003752_10
TS23: thoracic ganglion Strong Regionally restricted euxassay_003752_10
Specimen euxassay_003752_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_11
TS23: brain Strong Uniform euxassay_003752_11
TS23: spinal cord Strong Uniform euxassay_003752_11
TS23: thoracic ganglion Strong Regionally restricted euxassay_003752_11
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_003752_11
Specimen euxassay_003752_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_12
TS23: brain Strong Uniform euxassay_003752_12
TS23: spinal cord Strong Uniform euxassay_003752_12
TS23: thoracic ganglion Strong Regionally restricted euxassay_003752_12
Specimen euxassay_003752_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_13
TS23: brain Strong Uniform euxassay_003752_13
TS23: spinal cord Strong Uniform euxassay_003752_13
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_003752_13
Specimen euxassay_003752_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_14
TS23: brain Strong Uniform euxassay_003752_14
TS23: spinal cord Strong Uniform euxassay_003752_14
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_003752_14
TS23: glans of male genital tubercle Strong Regionally restricted euxassay_003752_14
Specimen euxassay_003752_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_15
TS23: brain Strong Uniform euxassay_003752_15
TS23: spinal cord Strong Uniform euxassay_003752_15
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_003752_15
Specimen euxassay_003752_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_003752_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_16
TS23: brain Strong Uniform euxassay_003752_16
Specimen euxassay_003752_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003752_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003752_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_003752_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_17
TS23: brain Strong Uniform euxassay_003752_17
Specimen euxassay_003752_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_003752_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_003752_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_18
TS23: brain Strong Uniform euxassay_003752_18
Specimen euxassay_003752_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_003752_19
TS23: brain Strong Uniform euxassay_003752_19
Specimen euxassay_003752_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_20
TS23: facial ganglion Strong Regionally restricted euxassay_003752_20
TS23: brain Strong Uniform euxassay_003752_20
Specimen euxassay_003752_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_21
TS23: facial ganglion Strong Regionally restricted euxassay_003752_21
TS23: brain Strong Uniform euxassay_003752_21
Specimen euxassay_003752_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_003752_22
TS23: brain Strong Uniform euxassay_003752_22
Specimen euxassay_003752_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Uniform euxassay_003752_23
TS23: neural retina Strong Regionally restricted euxassay_003752_23
Specimen euxassay_003752_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Uniform euxassay_003752_24
TS23: neural retina Strong Regionally restricted euxassay_003752_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory