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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827707
Gene symbol: Rfx5
Gene name: regulatory factor X, 5 (influences HLA class II expression)
Probe: T3872
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000805_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000805_04
TS23: facial ganglion Strong Uniform euxassay_000805_04
Specimen euxassay_000805_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000805_05
TS23: trigeminal ganglion Strong Uniform euxassay_000805_05
TS23: vestibular ganglion Strong Uniform euxassay_000805_05
Specimen euxassay_000805_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000805_06
TS23: trigeminal ganglion Strong Uniform euxassay_000805_06
TS23: vestibular ganglion Strong Uniform euxassay_000805_06
Specimen euxassay_000805_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000805_07
TS23: trigeminal ganglion Strong Uniform euxassay_000805_07
TS23: cochlear ganglion Strong Uniform euxassay_000805_07
TS23: vestibular ganglion Strong Uniform euxassay_000805_07
Specimen euxassay_000805_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000805_08
TS23: cochlear ganglion Moderate Uniform euxassay_000805_08
TS23: vestibular ganglion Moderate Uniform euxassay_000805_08
TS23: inferior glossopharyngeal ganglion Moderate Uniform euxassay_000805_08
TS23: superior glossopharyngeal ganglion Moderate Uniform euxassay_000805_08
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_000805_08 trigeminal motor nucleus
Specimen euxassay_000805_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Uniform euxassay_000805_09
TS23: dorsal root ganglion Strong Uniform euxassay_000805_09
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_000805_09 facial motor nucleus
Specimen euxassay_000805_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Uniform euxassay_000805_10
TS23: dorsal root ganglion Strong Uniform euxassay_000805_10
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_000805_10 facial motor nucleus
Specimen euxassay_000805_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Uniform euxassay_000805_11
TS23: medulla oblongata basal plate Weak Regionally restricted euxassay_000805_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_000805_11
Specimen euxassay_000805_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Uniform euxassay_000805_12
Specimen euxassay_000805_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_000805_16 facial motor nucleus
Specimen euxassay_000805_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000805_17
TS23: vagus ganglion Strong Uniform euxassay_000805_17
TS23: dorsal root ganglion Strong Uniform euxassay_000805_17
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_000805_17 facial motor nucleus and abducens nerve nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_000805_17
Specimen euxassay_000805_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000805_18
TS23: vagus ganglion Strong Uniform euxassay_000805_18
TS23: vestibular ganglion Strong Uniform euxassay_000805_18
TS23: dorsal root ganglion Strong Uniform euxassay_000805_18
TS23: medulla oblongata basal plate Moderate Regionally restricted euxassay_000805_18 trigeminal motor nucleus
Specimen euxassay_000805_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlear ganglion Strong Uniform euxassay_000805_19
TS23: vestibular ganglion Strong Uniform euxassay_000805_19
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000805_19
TS23: superior glossopharyngeal ganglion Strong Uniform euxassay_000805_19
TS23: trigeminal ganglion Strong Uniform euxassay_000805_19
TS23: dorsal root ganglion Strong Uniform euxassay_000805_19
Specimen euxassay_000805_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000805_20
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000805_20
TS23: superior glossopharyngeal ganglion Strong Uniform euxassay_000805_20
TS23: cochlear ganglion Strong Uniform euxassay_000805_20
TS23: vestibular ganglion Strong Uniform euxassay_000805_20
Specimen euxassay_000805_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Uniform euxassay_000805_21
TS23: trigeminal ganglion Strong Uniform euxassay_000805_21
TS23: vestibular ganglion Strong Uniform euxassay_000805_21
Specimen euxassay_000805_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibular ganglion Strong Uniform euxassay_000805_22
TS23: trigeminal ganglion Strong Uniform euxassay_000805_22
TS23: facial ganglion Strong Uniform euxassay_000805_22
Specimen euxassay_000805_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000805_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
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