About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827655
Gene symbol: Rbm47
Gene name: RNA binding motif protein 47
Probe: MGC clone 37504
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002217_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_01
Specimen euxassay_002217_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_02
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_02
TS23: lung Moderate Spotted euxassay_002217_02
Specimen euxassay_002217_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_03
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_03
TS23: lung Moderate Spotted euxassay_002217_03
Specimen euxassay_002217_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_04
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_04
TS23: lung Moderate Spotted euxassay_002217_04
Specimen euxassay_002217_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_05
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_05
TS23: lung Moderate Spotted euxassay_002217_05
Specimen euxassay_002217_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_06
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_06
TS23: renal calyx Strong Regionally restricted euxassay_002217_06
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002217_06
TS23: lung Moderate Spotted euxassay_002217_06
TS23: adrenal gland Weak Regionally restricted euxassay_002217_06
Specimen euxassay_002217_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_07
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_07
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_07
TS23: renal pelvis Moderate Regionally restricted euxassay_002217_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002217_07
TS23: pancreas Strong Regionally restricted euxassay_002217_07
TS23: lung Moderate Spotted euxassay_002217_07
TS23: adrenal gland Weak Regionally restricted euxassay_002217_07
Specimen euxassay_002217_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_08
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_08
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_08
TS23: renal calyx Moderate Regionally restricted euxassay_002217_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002217_08
TS23: pancreas Strong Regionally restricted euxassay_002217_08
TS23: lung Moderate Spotted euxassay_002217_08
TS23: adrenal gland Weak Regionally restricted euxassay_002217_08
Specimen euxassay_002217_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_09
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_09
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_09
TS23: renal calyx Moderate Regionally restricted euxassay_002217_09
TS23: pancreas Strong Regionally restricted euxassay_002217_09
TS23: thymus primordium Moderate Uniform euxassay_002217_09
TS23: lung Moderate Spotted euxassay_002217_09
Specimen euxassay_002217_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Strong Regionally restricted euxassay_002217_10
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_10
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_10
TS23: pancreas Strong Regionally restricted euxassay_002217_10
TS23: thymus primordium Moderate Uniform euxassay_002217_10
Specimen euxassay_002217_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_002217_11
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_11
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_11
TS23: pancreas Strong Regionally restricted euxassay_002217_11
TS23: thymus primordium Moderate Uniform euxassay_002217_11
TS23: lung Moderate Spotted euxassay_002217_11
Specimen euxassay_002217_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_002217_12
TS23: hindgut Strong Regionally restricted euxassay_002217_12
TS23: foregut-midgut junction Strong Regionally restricted euxassay_002217_12
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_12
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_12
TS23: thymus primordium Moderate Uniform euxassay_002217_12
TS23: lung Moderate Spotted euxassay_002217_12
Specimen euxassay_002217_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rectum Strong Regionally restricted euxassay_002217_13
TS23: foregut-midgut junction Strong Regionally restricted euxassay_002217_13
TS23: hindgut Strong Regionally restricted euxassay_002217_13
TS23: midgut Strong Regionally restricted euxassay_002217_13
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_13
TS23: thymus primordium Strong Uniform euxassay_002217_13
TS23: lung Moderate Spotted euxassay_002217_13
TS23: bladder Strong Regionally restricted euxassay_002217_13
TS23: urethra Weak Regionally restricted euxassay_002217_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_002217_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_002217_14
TS23: hindgut Strong Regionally restricted euxassay_002217_14
TS23: foregut-midgut junction Strong Regionally restricted euxassay_002217_14
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_14
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_14
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_002217_14
TS23: pancreas Strong Regionally restricted euxassay_002217_14
TS23: thymus primordium Moderate Uniform euxassay_002217_14
TS23: lung Moderate Spotted euxassay_002217_14
TS23: bladder Strong Regionally restricted euxassay_002217_14
TS23: urethra Weak Regionally restricted euxassay_002217_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: adrenal gland Weak Regionally restricted euxassay_002217_14
Specimen euxassay_002217_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foregut-midgut junction Strong Regionally restricted euxassay_002217_15
TS23: hindgut Strong Regionally restricted euxassay_002217_15
TS23: midgut Strong Regionally restricted euxassay_002217_15
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_15
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_15
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_002217_15
TS23: renal calyx Moderate Regionally restricted euxassay_002217_15
TS23: pancreas Strong Regionally restricted euxassay_002217_15
TS23: lung Moderate Spotted euxassay_002217_15
TS23: adrenal gland Weak Regionally restricted euxassay_002217_15
Specimen euxassay_002217_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foregut-midgut junction Strong Regionally restricted euxassay_002217_16
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_16
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_16
TS23: renal calyx Strong Regionally restricted euxassay_002217_16
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002217_16
TS23: pancreas Strong Regionally restricted euxassay_002217_16
TS23: lung Moderate Spotted euxassay_002217_16
TS23: adrenal gland Weak Regionally restricted euxassay_002217_16
Specimen euxassay_002217_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_002217_17
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_17
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_17
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_002217_17
TS23: renal pelvis Strong Regionally restricted euxassay_002217_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002217_17
TS23: lung Moderate Spotted euxassay_002217_17
Specimen euxassay_002217_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Strong Regionally restricted euxassay_002217_18
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_18
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_18
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_002217_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_18
TS23: renal calyx Strong Regionally restricted euxassay_002217_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002217_18
TS23: lung Moderate Spotted euxassay_002217_18
Specimen euxassay_002217_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_19
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_19
TS23: renal calyx Moderate Regionally restricted euxassay_002217_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002217_19
TS23: lung Moderate Spotted euxassay_002217_19
Specimen euxassay_002217_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002217_20
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002217_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_002217_20
TS23: lung Moderate Spotted euxassay_002217_20
Specimen euxassay_002217_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Spotted euxassay_002217_21
Specimen euxassay_002217_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Spotted euxassay_002217_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory