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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827289
Gene symbol: Plxdc2
Gene name: plexin domain containing 2
Probe: MGC clone 67933
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002573_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_01
TS23: epidermis Moderate Regionally restricted euxassay_002573_01
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_01
Specimen euxassay_002573_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_02
TS23: epidermis Moderate Regionally restricted euxassay_002573_02
TS23: humerus Moderate Regionally restricted euxassay_002573_02 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_02
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_02
Specimen euxassay_002573_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_03
TS23: epidermis Moderate Regionally restricted euxassay_002573_03
TS23: humerus Moderate Regionally restricted euxassay_002573_03 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_03
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_03
TS23: diaphragm Moderate Regionally restricted euxassay_002573_03
Specimen euxassay_002573_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_04
TS23: epidermis Moderate Regionally restricted euxassay_002573_04
TS23: humerus Moderate Regionally restricted euxassay_002573_04 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_04
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_04
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_04
TS23: diaphragm Moderate Regionally restricted euxassay_002573_04
Specimen euxassay_002573_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_05
TS23: epidermis Moderate Regionally restricted euxassay_002573_05
TS23: humerus Moderate Regionally restricted euxassay_002573_05 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_05
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_05
TS23: diaphragm Strong Regionally restricted euxassay_002573_05
Specimen euxassay_002573_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_06
TS23: epidermis Moderate Regionally restricted euxassay_002573_06
TS23: vibrissa Moderate Regionally restricted euxassay_002573_06
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_06
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_06
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_06
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_06
TS23: diaphragm Strong Regionally restricted euxassay_002573_06
Specimen euxassay_002573_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_07
TS23: epidermis Moderate Regionally restricted euxassay_002573_07
TS23: vibrissa Moderate Regionally restricted euxassay_002573_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_07
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_07
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_07
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_07
TS23: diaphragm Strong Regionally restricted euxassay_002573_07
TS23: cochlear duct Strong Regionally restricted euxassay_002573_07
Specimen euxassay_002573_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_08
TS23: epidermis Moderate Regionally restricted euxassay_002573_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_08
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_08
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_08
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_08
TS23: diaphragm Strong Regionally restricted euxassay_002573_08
TS23: cochlear duct Strong Regionally restricted euxassay_002573_08
Specimen euxassay_002573_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_09
TS23: epidermis Moderate Regionally restricted euxassay_002573_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_09
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_09
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_09
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_09
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_002573_09
TS23: ventral grey horn Moderate Single cells euxassay_002573_09
TS23: diaphragm Strong Regionally restricted euxassay_002573_09
Specimen euxassay_002573_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_002573_10
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_10
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_10
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_10
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_002573_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_10
TS23: ventral grey horn Moderate Single cells euxassay_002573_10
TS23: diaphragm Strong Regionally restricted euxassay_002573_10
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_10
Specimen euxassay_002573_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_002573_11
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_11
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_11
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_11
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_11
TS23: pons ventricular layer Strong Regionally restricted euxassay_002573_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_002573_11
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_002573_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_11
TS23: ventral grey horn Moderate Single cells euxassay_002573_11
TS23: diaphragm Strong Regionally restricted euxassay_002573_11
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_11
Specimen euxassay_002573_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_002573_12
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_12
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_12
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_12
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_12
TS23: ventral grey horn Moderate Single cells euxassay_002573_12
TS23: diaphragm Strong Regionally restricted euxassay_002573_12
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_12
Specimen euxassay_002573_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_002573_13
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_13
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_13
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_13
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_13
TS23: ventral grey horn Moderate Single cells euxassay_002573_13
TS23: diaphragm Strong Regionally restricted euxassay_002573_13
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_13
Specimen euxassay_002573_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_002573_14
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_14
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_14
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_14
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_14
TS23: ventral grey horn Moderate Single cells euxassay_002573_14
TS23: diaphragm Strong Regionally restricted euxassay_002573_14
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_14
Specimen euxassay_002573_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_002573_15
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_15
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_15
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_15
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_15
TS23: diaphragm Strong Regionally restricted euxassay_002573_15
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_15
Specimen euxassay_002573_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_16
TS23: epidermis Moderate Regionally restricted euxassay_002573_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_16
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_16
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_16
TS23: diencephalon lateral wall mantle layer Moderate Single cells euxassay_002573_16
TS23: hypothalamus mantle layer Moderate Single cells euxassay_002573_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_002573_16
TS23: diaphragm Strong Regionally restricted euxassay_002573_16
TS23: cochlear duct Strong Regionally restricted euxassay_002573_16
TS23: tongue epithelium Moderate Regionally restricted euxassay_002573_16
Specimen euxassay_002573_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_17
TS23: epidermis Moderate Regionally restricted euxassay_002573_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_17
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_17
TS23: diaphragm Moderate Regionally restricted euxassay_002573_17
TS23: cochlear duct Strong Regionally restricted euxassay_002573_17
Specimen euxassay_002573_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_18
TS23: epidermis Moderate Regionally restricted euxassay_002573_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_18
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_18
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_002573_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_002573_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_002573_18
TS23: cochlear duct Strong Regionally restricted euxassay_002573_18
Specimen euxassay_002573_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_19
TS23: vibrissa Strong Regionally restricted euxassay_002573_19
TS23: epidermis Strong Regionally restricted euxassay_002573_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_19
TS23: humerus Moderate Regionally restricted euxassay_002573_19 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_19
TS23: cochlear duct Strong Regionally restricted euxassay_002573_19
Specimen euxassay_002573_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_20
TS23: epidermis Strong Regionally restricted euxassay_002573_20
TS23: vibrissa Strong Regionally restricted euxassay_002573_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_002573_20
TS23: humerus Moderate Regionally restricted euxassay_002573_20 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_002573_20
TS23: cochlear duct Strong Regionally restricted euxassay_002573_20
Specimen euxassay_002573_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_21
TS23: epidermis Strong Regionally restricted euxassay_002573_21
TS23: humerus Moderate Regionally restricted euxassay_002573_21 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_21
Specimen euxassay_002573_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_22
TS23: epidermis Moderate Regionally restricted euxassay_002573_22
TS23: humerus Moderate Regionally restricted euxassay_002573_22 periosteum
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_22
Specimen euxassay_002573_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_23
TS23: epidermis Moderate Regionally restricted euxassay_002573_23
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_23
Specimen euxassay_002573_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: body wall mesenchyme Strong Regionally restricted euxassay_002573_24
TS23: epidermis Moderate Regionally restricted euxassay_002573_24
TS23: telencephalon mantle layer Moderate Single cells euxassay_002573_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory