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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827238
Gene symbol: Pkp1
Gene name: plakophilin 1
Probe: T36797
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009488_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_01
TS23: vibrissa Strong Regionally restricted euxassay_009488_01
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009488_01
TS23: stomach Weak Regionally restricted euxassay_009488_01
Specimen euxassay_009488_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009488_02
TS23: epidermis Strong Regionally restricted euxassay_009488_02
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009488_02
TS23: stomach Weak Regionally restricted euxassay_009488_02
Specimen euxassay_009488_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_03
TS23: vibrissa Strong Regionally restricted euxassay_009488_03
TS23: oral epithelium Strong Regionally restricted euxassay_009488_03
TS23: stomach Weak Regionally restricted euxassay_009488_03
Specimen euxassay_009488_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_009488_04
TS23: epidermis Strong Regionally restricted euxassay_009488_04
TS23: oral epithelium Strong Regionally restricted euxassay_009488_04
TS23: upper jaw molar Strong Regionally restricted euxassay_009488_04
TS23: lower jaw molar Strong Regionally restricted euxassay_009488_04
TS23: stomach Weak Regionally restricted euxassay_009488_04
Specimen euxassay_009488_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_05
TS23: upper jaw molar Strong Regionally restricted euxassay_009488_05
TS23: lower jaw molar Strong Regionally restricted euxassay_009488_05
TS23: oral epithelium Strong Regionally restricted euxassay_009488_05
Specimen euxassay_009488_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_06
TS23: oral epithelium Strong Regionally restricted euxassay_009488_06
Specimen euxassay_009488_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_07
TS23: oral epithelium Strong Regionally restricted euxassay_009488_07
TS23: naris Strong Regionally restricted euxassay_009488_07
Specimen euxassay_009488_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_08
TS23: upper jaw incisor Strong Regionally restricted euxassay_009488_08
TS23: lower jaw incisor Strong Regionally restricted euxassay_009488_08
TS23: oral epithelium Strong Regionally restricted euxassay_009488_08
TS23: naris Strong Regionally restricted euxassay_009488_08
Specimen euxassay_009488_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_09
TS23: lower jaw incisor Strong Regionally restricted euxassay_009488_09
TS23: oral epithelium Strong Regionally restricted euxassay_009488_09
TS23: naris Strong Regionally restricted euxassay_009488_09
Specimen euxassay_009488_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_10
Specimen euxassay_009488_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_009488_11
TS23: oral epithelium Strong Regionally restricted euxassay_009488_11
TS23: naris Strong Regionally restricted euxassay_009488_11
TS23: esophagus Moderate Regionally restricted euxassay_009488_11
TS23: urethra Moderate Regionally restricted euxassay_009488_11 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: larynx Weak Regionally restricted euxassay_009488_11
Specimen euxassay_009488_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_009488_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_009488_12
TS23: oral epithelium Strong Regionally restricted euxassay_009488_12
TS23: naris Strong Regionally restricted euxassay_009488_12
TS23: esophagus Weak Regionally restricted euxassay_009488_12
TS23: urethra Moderate Regionally restricted euxassay_009488_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: larynx Weak Regionally restricted euxassay_009488_12
Specimen euxassay_009488_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_13
TS23: oral epithelium Strong Regionally restricted euxassay_009488_13
TS23: thymus primordium Strong Single cells euxassay_009488_13
Specimen euxassay_009488_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_14
TS23: oral epithelium Strong Regionally restricted euxassay_009488_14
TS23: thymus primordium Strong Single cells euxassay_009488_14
Specimen euxassay_009488_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_15
TS23: oral epithelium Strong Regionally restricted euxassay_009488_15
Specimen euxassay_009488_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_16
TS23: oral epithelium Strong Regionally restricted euxassay_009488_16
Specimen euxassay_009488_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_17
TS23: vibrissa Strong Regionally restricted euxassay_009488_17
TS23: oral epithelium Strong Regionally restricted euxassay_009488_17
TS23: upper jaw molar Strong Regionally restricted euxassay_009488_17
TS23: lower jaw molar Strong Regionally restricted euxassay_009488_17
Specimen euxassay_009488_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_18
TS23: vibrissa Strong Regionally restricted euxassay_009488_18
TS23: lower jaw molar Strong Regionally restricted euxassay_009488_18
TS23: oral epithelium Strong Regionally restricted euxassay_009488_18
Specimen euxassay_009488_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_19
TS23: vibrissa Strong Regionally restricted euxassay_009488_19
TS23: oral epithelium Strong Regionally restricted euxassay_009488_19
Specimen euxassay_009488_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_20
Specimen euxassay_009488_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_21
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009488_21
Specimen euxassay_009488_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Strong Regionally restricted euxassay_009488_22
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009488_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory