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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827188
Gene symbol: Phf6
Gene name: PHD finger protein 6
Probe: MGC clone 58062
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005159_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: eyelid Strong Regionally restricted euxassay_005159_01
TS23: retina Strong Regionally restricted euxassay_005159_01
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_01
TS23: liver Moderate Regionally restricted euxassay_005159_01
TS23: limb Moderate Regionally restricted euxassay_005159_01
Specimen euxassay_005159_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_02
TS23: lung Strong Regionally restricted euxassay_005159_02
TS23: retina Strong Regionally restricted euxassay_005159_02
TS23: eyelid Strong Regionally restricted euxassay_005159_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_02
TS23: liver Moderate Regionally restricted euxassay_005159_02
TS23: limb Moderate Regionally restricted euxassay_005159_02
Specimen euxassay_005159_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_03
TS23: lung Strong Regionally restricted euxassay_005159_03
TS23: retina Strong Regionally restricted euxassay_005159_03
TS23: eyelid Strong Regionally restricted euxassay_005159_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_03
TS23: liver Moderate Regionally restricted euxassay_005159_03
TS23: limb Weak Regionally restricted euxassay_005159_03
Specimen euxassay_005159_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_04
TS23: lung Strong Regionally restricted euxassay_005159_04
TS23: metanephros Strong Regionally restricted euxassay_005159_04
TS23: retina Moderate Regionally restricted euxassay_005159_04
TS23: eyelid Moderate Regionally restricted euxassay_005159_04
TS23: vibrissa Moderate Regionally restricted euxassay_005159_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_005159_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_04
TS23: liver Moderate Regionally restricted euxassay_005159_04
TS23: limb Weak Regionally restricted euxassay_005159_04
Specimen euxassay_005159_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_05
TS23: spinal cord Strong Regionally restricted euxassay_005159_05
TS23: metanephros Strong Regionally restricted euxassay_005159_05
TS23: lung Strong Regionally restricted euxassay_005159_05
TS23: eyelid Moderate Regionally restricted euxassay_005159_05
TS23: retina Moderate Regionally restricted euxassay_005159_05
TS23: vibrissa Strong Regionally restricted euxassay_005159_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005159_05
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_05
TS23: liver Moderate Regionally restricted euxassay_005159_05
TS23: limb Moderate Regionally restricted euxassay_005159_05
Specimen euxassay_005159_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_06
TS23: spinal cord Strong Regionally restricted euxassay_005159_06
TS23: metanephros Strong Regionally restricted euxassay_005159_06
TS23: lung Strong Regionally restricted euxassay_005159_06
TS23: submandibular gland primordium Strong Regionally restricted euxassay_005159_06
TS23: vibrissa Moderate Regionally restricted euxassay_005159_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_005159_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005159_06
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_06
TS23: liver Moderate Regionally restricted euxassay_005159_06
TS23: limb Moderate Regionally restricted euxassay_005159_06
Specimen euxassay_005159_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_07
TS23: spinal cord Strong Regionally restricted euxassay_005159_07
TS23: metanephros Strong Regionally restricted euxassay_005159_07
TS23: lung Strong Regionally restricted euxassay_005159_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_005159_07
TS23: vibrissa Moderate Regionally restricted euxassay_005159_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_07
TS23: thoracic ganglion Strong Regionally restricted euxassay_005159_07
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_005159_07
TS23: cervical ganglion Strong Regionally restricted euxassay_005159_07
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_07
TS23: liver Moderate Regionally restricted euxassay_005159_07
TS23: limb Moderate Regionally restricted euxassay_005159_07
Specimen euxassay_005159_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_08
TS23: spinal cord Strong Regionally restricted euxassay_005159_08
TS23: metanephros Strong Regionally restricted euxassay_005159_08
TS23: lung Strong Regionally restricted euxassay_005159_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_005159_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_08
TS23: liver Moderate Regionally restricted euxassay_005159_08
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_08
TS23: limb Moderate Regionally restricted euxassay_005159_08
Specimen euxassay_005159_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_09
TS23: spinal cord Strong Regionally restricted euxassay_005159_09
TS23: lung Strong Regionally restricted euxassay_005159_09
TS23: thymus primordium Strong Regionally restricted euxassay_005159_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_09
TS23: liver Moderate Regionally restricted euxassay_005159_09
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_09
TS23: limb Moderate Regionally restricted euxassay_005159_09
Specimen euxassay_005159_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_10
TS23: spinal cord Strong Regionally restricted euxassay_005159_10
TS23: lung Strong Regionally restricted euxassay_005159_10
TS23: thymus primordium Strong Regionally restricted euxassay_005159_10
TS23: trachea Strong Regionally restricted euxassay_005159_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_10
TS23: thoracic ganglion Strong Regionally restricted euxassay_005159_10
TS23: liver Moderate Regionally restricted euxassay_005159_10
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_10
TS23: limb Moderate Regionally restricted euxassay_005159_10
Specimen euxassay_005159_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_11
TS23: spinal cord Strong Regionally restricted euxassay_005159_11
TS23: lung Strong Regionally restricted euxassay_005159_11
TS23: thymus primordium Strong Regionally restricted euxassay_005159_11
TS23: trachea Strong Regionally restricted euxassay_005159_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_11
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_005159_11
TS23: naris Strong Regionally restricted euxassay_005159_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005159_11
TS23: thoracic ganglion Strong Regionally restricted euxassay_005159_11
TS23: liver Moderate Regionally restricted euxassay_005159_11
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_11
TS23: limb Moderate Regionally restricted euxassay_005159_11
Specimen euxassay_005159_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_12
TS23: spinal cord Strong Regionally restricted euxassay_005159_12
TS23: lung Strong Regionally restricted euxassay_005159_12
TS23: thymus primordium Strong Regionally restricted euxassay_005159_12
TS23: naris Strong Regionally restricted euxassay_005159_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_12
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_005159_12
TS23: adenohypophysis Moderate Regionally restricted euxassay_005159_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005159_12
TS23: thoracic ganglion Strong Regionally restricted euxassay_005159_12
TS23: liver Moderate Regionally restricted euxassay_005159_12
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_12
TS23: limb Moderate Regionally restricted euxassay_005159_12
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005159_12
Specimen euxassay_005159_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_13
TS23: spinal cord Strong Regionally restricted euxassay_005159_13
TS23: lung Strong Regionally restricted euxassay_005159_13
TS23: metanephros Strong Regionally restricted euxassay_005159_13
TS23: thymus primordium Strong Regionally restricted euxassay_005159_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_13
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_005159_13
TS23: adenohypophysis Strong Regionally restricted euxassay_005159_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_005159_13
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_005159_13
TS23: liver Moderate Regionally restricted euxassay_005159_13
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_13
TS23: limb Moderate Regionally restricted euxassay_005159_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005159_13
Specimen euxassay_005159_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_14
TS23: spinal cord Strong Regionally restricted euxassay_005159_14
TS23: metanephros Strong Regionally restricted euxassay_005159_14
TS23: lung Strong Regionally restricted euxassay_005159_14
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_005159_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_14
TS23: adenohypophysis Weak Regionally restricted euxassay_005159_14
TS23: liver Moderate Regionally restricted euxassay_005159_14
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_14
TS23: tail Moderate Regionally restricted euxassay_005159_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005159_14
Specimen euxassay_005159_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_15
TS23: metanephros Strong Regionally restricted euxassay_005159_15
TS23: lung Strong Regionally restricted euxassay_005159_15
TS23: submandibular gland primordium Strong Regionally restricted euxassay_005159_15
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_005159_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_15
TS23: cervical ganglion Strong Regionally restricted euxassay_005159_15
TS23: liver Moderate Regionally restricted euxassay_005159_15
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_15
TS23: tail Moderate Regionally restricted euxassay_005159_15
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005159_15
Specimen euxassay_005159_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_16
TS23: metanephros Strong Regionally restricted euxassay_005159_16
TS23: lung Strong Regionally restricted euxassay_005159_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_005159_16
TS23: nasal cavity respiratory epithelium Strong Regionally restricted euxassay_005159_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_16
TS23: liver Moderate Regionally restricted euxassay_005159_16
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_16
TS23: tail Moderate Regionally restricted euxassay_005159_16
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005159_16
Specimen euxassay_005159_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_17
TS23: lung Strong Regionally restricted euxassay_005159_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_005159_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_17
TS23: liver Moderate Regionally restricted euxassay_005159_17
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_17
TS23: tail Moderate Regionally restricted euxassay_005159_17
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005159_17
Specimen euxassay_005159_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_18
TS23: lung Strong Regionally restricted euxassay_005159_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_18
TS23: liver Moderate Regionally restricted euxassay_005159_18
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_18
TS23: tail Moderate Regionally restricted euxassay_005159_18
Specimen euxassay_005159_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_19
TS23: lung Strong Regionally restricted euxassay_005159_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_19
TS23: vibrissa Moderate Regionally restricted euxassay_005159_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_19
TS23: liver Moderate Regionally restricted euxassay_005159_19
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_19
TS23: tail Moderate Regionally restricted euxassay_005159_19
Specimen euxassay_005159_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_20
TS23: lung Strong Regionally restricted euxassay_005159_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_005159_20
TS23: vibrissa Moderate Regionally restricted euxassay_005159_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_005159_20
TS23: liver Moderate Regionally restricted euxassay_005159_20
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_20
TS23: tail Moderate Regionally restricted euxassay_005159_20
Specimen euxassay_005159_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_21
TS23: vibrissa Strong Regionally restricted euxassay_005159_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_005159_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_005159_21
TS23: liver Moderate Regionally restricted euxassay_005159_21
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_21
TS23: limb Moderate Regionally restricted euxassay_005159_21
TS23: tail Moderate Regionally restricted euxassay_005159_21
Specimen euxassay_005159_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_005159_22
TS23: retina Strong Regionally restricted euxassay_005159_22
TS23: liver Moderate Regionally restricted euxassay_005159_22
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_005159_22
TS23: limb Moderate Regionally restricted euxassay_005159_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory