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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827134
Gene symbol: Pdlim4
Gene name: PDZ and LIM domain 4
Probe: MGC clone 41095
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001915_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_01
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_01
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_01
TS23: foot mesenchyme Strong Regionally restricted euxassay_001915_01
TS23: hand mesenchyme Strong Regionally restricted euxassay_001915_01
TS23: diaphragm Moderate Regionally restricted euxassay_001915_01
Specimen euxassay_001915_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_02
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_02
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_02
TS23: foot mesenchyme Strong Regionally restricted euxassay_001915_02
TS23: hand mesenchyme Strong Regionally restricted euxassay_001915_02
TS23: diaphragm Moderate Regionally restricted euxassay_001915_02
Specimen euxassay_001915_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_03
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_03
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_03
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_03
TS23: foot mesenchyme Strong Regionally restricted euxassay_001915_03
TS23: hand mesenchyme Strong Regionally restricted euxassay_001915_03
TS23: diaphragm Moderate Regionally restricted euxassay_001915_03
TS23: stomach Weak Regionally restricted euxassay_001915_03 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_03
Specimen euxassay_001915_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_04
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_04
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_04
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_04
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_04
TS23: foot mesenchyme Strong Regionally restricted euxassay_001915_04
TS23: leg Strong Regionally restricted euxassay_001915_04
TS23: diaphragm Moderate Regionally restricted euxassay_001915_04
TS23: stomach Weak Regionally restricted euxassay_001915_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_04
Specimen euxassay_001915_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_05
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_05
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_05
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_05
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_05
TS23: leg Strong Regionally restricted euxassay_001915_05
TS23: diaphragm Moderate Regionally restricted euxassay_001915_05
TS23: stomach Weak Regionally restricted euxassay_001915_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_05
Specimen euxassay_001915_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_06
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_06
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_06
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_06
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_06
TS23: leg Strong Regionally restricted euxassay_001915_06
TS23: diaphragm Moderate Regionally restricted euxassay_001915_06
TS23: stomach Weak Regionally restricted euxassay_001915_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_06
Specimen euxassay_001915_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_07
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_07
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_07
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_07
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_07
TS23: leg Strong Regionally restricted euxassay_001915_07
TS23: diaphragm Moderate Regionally restricted euxassay_001915_07
TS23: stomach Weak Regionally restricted euxassay_001915_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_07
Specimen euxassay_001915_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_08
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_08
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_08
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_08
TS23: foot mesenchyme Strong Regionally restricted euxassay_001915_08
TS23: leg Strong Regionally restricted euxassay_001915_08
TS23: diaphragm Moderate Regionally restricted euxassay_001915_08
TS23: stomach Weak Regionally restricted euxassay_001915_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_08
Specimen euxassay_001915_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_09
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_09
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_09
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_09
TS23: foot mesenchyme Strong Regionally restricted euxassay_001915_09
TS23: tongue Moderate Regionally restricted euxassay_001915_09
TS23: ventral grey horn Strong Single cells euxassay_001915_09
TS23: diaphragm Moderate Regionally restricted euxassay_001915_09
TS23: stomach Weak Regionally restricted euxassay_001915_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_09
Specimen euxassay_001915_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_10
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_10
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_10
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_10
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001915_10
TS23: tongue Moderate Regionally restricted euxassay_001915_10
TS23: ventral grey horn Strong Single cells euxassay_001915_10
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_001915_10
TS23: diaphragm Moderate Regionally restricted euxassay_001915_10
TS23: esophagus Weak Regionally restricted euxassay_001915_10
TS23: stomach Weak Regionally restricted euxassay_001915_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_10
TS23: midgut Weak Regionally restricted euxassay_001915_10 smooth muscle
Specimen euxassay_001915_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_11
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_11
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_11
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_11
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_11
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_001915_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001915_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_11
TS23: tongue Moderate Regionally restricted euxassay_001915_11
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_001915_11
TS23: ventral grey horn Strong Single cells euxassay_001915_11
TS23: diaphragm Moderate Regionally restricted euxassay_001915_11
TS23: esophagus Weak Regionally restricted euxassay_001915_11
TS23: stomach Weak Regionally restricted euxassay_001915_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_11
TS23: midgut Weak Regionally restricted euxassay_001915_11 smooth muscle
Specimen euxassay_001915_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_12
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_12
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_001915_12
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_001915_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001915_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_12
TS23: tail mesenchyme Strong Regionally restricted euxassay_001915_12
TS23: tongue Moderate Regionally restricted euxassay_001915_12
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_001915_12
TS23: ventral grey horn Strong Single cells euxassay_001915_12
TS23: midgut Weak Regionally restricted euxassay_001915_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_12
Specimen euxassay_001915_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_13
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_13
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_001915_13
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_001915_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001915_13
TS23: tail mesenchyme Strong Regionally restricted euxassay_001915_13
TS23: tongue Moderate Regionally restricted euxassay_001915_13
TS23: midgut Weak Regionally restricted euxassay_001915_13 smooth muscle
TS23: hindgut Weak Regionally restricted euxassay_001915_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_13
Specimen euxassay_001915_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_14
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_14
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_001915_14
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_001915_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001915_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_14
TS23: tail mesenchyme Strong Regionally restricted euxassay_001915_14
TS23: tongue Moderate Regionally restricted euxassay_001915_14
TS23: midgut Weak Regionally restricted euxassay_001915_14 smooth muscle
TS23: hindgut Weak Regionally restricted euxassay_001915_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_14
Specimen euxassay_001915_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_15
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_15
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_15
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_15
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_15
TS23: diencephalon lateral wall ventricular layer Moderate Uniform euxassay_001915_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001915_15
TS23: tail mesenchyme Strong Regionally restricted euxassay_001915_15
TS23: diaphragm Moderate Regionally restricted euxassay_001915_15
TS23: midgut Weak Regionally restricted euxassay_001915_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_15
Specimen euxassay_001915_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_16
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_16
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_16
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_16
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_16
TS23: tail mesenchyme Strong Regionally restricted euxassay_001915_16
TS23: diaphragm Moderate Regionally restricted euxassay_001915_16
TS23: midgut Weak Regionally restricted euxassay_001915_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_16
Specimen euxassay_001915_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_17
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_17
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_17
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_17
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_001915_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_17
TS23: diaphragm Moderate Regionally restricted euxassay_001915_17
TS23: midgut Weak Regionally restricted euxassay_001915_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_17
Specimen euxassay_001915_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_18
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_18
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_18
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001915_18
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001915_18
TS23: diaphragm Moderate Regionally restricted euxassay_001915_18
TS23: midgut Weak Regionally restricted euxassay_001915_18 smooth muscle
TS23: smooth muscle tissue Present euxassay_001915_18
Specimen euxassay_001915_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_19
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_19
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_19
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_19
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_19
TS23: diaphragm Moderate Regionally restricted euxassay_001915_19
Specimen euxassay_001915_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_20
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_20
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_20
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_20
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_20
TS23: diaphragm Moderate Regionally restricted euxassay_001915_20
Specimen euxassay_001915_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_21
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_21
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_21
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_21
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_001915_21
TS23: diaphragm Moderate Regionally restricted euxassay_001915_21
Specimen euxassay_001915_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_22
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_22
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_22
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_22
Specimen euxassay_001915_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_23
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_23
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_23
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_23
Specimen euxassay_001915_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_001915_24
TS23: body wall mesenchyme Strong Regionally restricted euxassay_001915_24
TS23: head mesenchyme Strong Regionally restricted euxassay_001915_24
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001915_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory