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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827132
Gene symbol: Pdk1
Gene name: pyruvate dehydrogenase kinase, isoenzyme 1
Probe: MGC clone 28719
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001737_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_001737_02
Specimen euxassay_001737_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_001737_03
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_001737_03
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_001737_03
TS23: stomach Moderate Regionally restricted euxassay_001737_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_03
Specimen euxassay_001737_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_001737_04
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_001737_04
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_001737_04
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_001737_04
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_001737_04
TS23: vibrissa Weak Regionally restricted euxassay_001737_04
TS23: stomach Moderate Regionally restricted euxassay_001737_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_04
Specimen euxassay_001737_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_001737_05
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_001737_05
TS23: vibrissa Moderate Regionally restricted euxassay_001737_05
TS23: stomach Moderate Regionally restricted euxassay_001737_05
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_05
Specimen euxassay_001737_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_001737_06
TS23: stomach Moderate Regionally restricted euxassay_001737_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_001737_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_001737_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_06
Specimen euxassay_001737_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_001737_07
TS23: axial skeleton Moderate Regionally restricted euxassay_001737_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_001737_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_001737_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_07
Specimen euxassay_001737_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_001737_08
TS23: axial skeleton Moderate Regionally restricted euxassay_001737_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_001737_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_001737_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_08
Specimen euxassay_001737_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_001737_09
TS23: midgut Moderate Regionally restricted euxassay_001737_09
TS23: axial skeleton Moderate Regionally restricted euxassay_001737_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_09
TS23: thymus primordium Weak Regionally restricted euxassay_001737_09
Specimen euxassay_001737_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_001737_10
TS23: axial skeleton Moderate Regionally restricted euxassay_001737_10
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001737_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001737_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_10
TS23: thymus primordium Weak Regionally restricted euxassay_001737_10
Specimen euxassay_001737_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_001737_11
TS23: axial skeleton Moderate Regionally restricted euxassay_001737_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001737_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001737_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_11
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_001737_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_11
TS23: thymus primordium Weak Regionally restricted euxassay_001737_11
Specimen euxassay_001737_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_001737_12
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001737_12
TS23: hindgut Moderate Regionally restricted euxassay_001737_12
TS23: axial skeleton Moderate Regionally restricted euxassay_001737_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001737_12
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_12
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_001737_12
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001737_12
TS23: urethra Moderate Regionally restricted euxassay_001737_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: rectum Moderate Regionally restricted euxassay_001737_12
TS23: thymus primordium Weak Regionally restricted euxassay_001737_12
Specimen euxassay_001737_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001737_13
TS23: midgut Moderate Regionally restricted euxassay_001737_13
TS23: hindgut Moderate Regionally restricted euxassay_001737_13
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_13
TS23: thymus primordium Weak Regionally restricted euxassay_001737_13
Specimen euxassay_001737_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001737_14
TS23: midgut Moderate Regionally restricted euxassay_001737_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_001737_14
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_14
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_14
Specimen euxassay_001737_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_001737_15
TS23: upper jaw incisor Moderate Regionally restricted euxassay_001737_15
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_15
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001737_15
Specimen euxassay_001737_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_001737_16
TS23: upper jaw molar Moderate Regionally restricted euxassay_001737_16
TS23: lower jaw molar Moderate Regionally restricted euxassay_001737_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_16
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_001737_16
Specimen euxassay_001737_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_17
Specimen euxassay_001737_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw molar Moderate Regionally restricted euxassay_001737_18
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_001737_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_18
Specimen euxassay_001737_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_001737_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_001737_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001737_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory