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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827121
Gene symbol: Pde6c
Gene name: phosphodiesterase 6C, cGMP specific, cone, alpha prime
Probe: T38313
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010731_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_02
Specimen euxassay_010731_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_03
Specimen euxassay_010731_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_04
Specimen euxassay_010731_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_05
Specimen euxassay_010731_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_06
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_06
Specimen euxassay_010731_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_07
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_07
Specimen euxassay_010731_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_08
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_08
Specimen euxassay_010731_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_09
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_09
Specimen euxassay_010731_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_10
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_010731_10
Specimen euxassay_010731_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_11
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_11
Specimen euxassay_010731_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_12
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_12
Specimen euxassay_010731_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_010731_13
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_13
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_13
Specimen euxassay_010731_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_14
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_14
TS23: diencephalon roof plate Weak Regionally restricted euxassay_010731_14
Specimen euxassay_010731_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_15
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_15
Specimen euxassay_010731_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_16
Specimen euxassay_010731_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_17
Specimen euxassay_010731_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_18
Specimen euxassay_010731_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010731_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory