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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827071
Gene symbol: Pbxip1
Gene name: pre B cell leukemia transcription factor interacting protein 1
Probe: T31356
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012529_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012529_02
TS23: stomach Moderate Regionally restricted euxassay_012529_02
Specimen euxassay_012529_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012529_03
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_03
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_03
TS23: stomach Moderate Regionally restricted euxassay_012529_03
Specimen euxassay_012529_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_012529_04
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_04
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_04
TS23: stomach Moderate Regionally restricted euxassay_012529_04
Specimen euxassay_012529_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_05
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_05
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_05
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_05
TS23: stomach Moderate Regionally restricted euxassay_012529_05
Specimen euxassay_012529_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_06
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_06
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_06
TS23: heart ventricle Moderate Spotted euxassay_012529_06
TS23: stomach Moderate Regionally restricted euxassay_012529_06
Specimen euxassay_012529_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_07
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_07
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_07
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_07
TS23: heart ventricle Moderate Spotted euxassay_012529_07
TS23: stomach Moderate Regionally restricted euxassay_012529_07
Specimen euxassay_012529_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_08
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_08
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_08
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_08
TS23: heart ventricle Moderate Spotted euxassay_012529_08
TS23: diaphragm Moderate Regionally restricted euxassay_012529_08
TS23: stomach Moderate Regionally restricted euxassay_012529_08
Specimen euxassay_012529_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_09
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_09
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012529_09
TS23: tongue muscle Moderate Regionally restricted euxassay_012529_09
TS23: heart ventricle Moderate Spotted euxassay_012529_09
TS23: diaphragm Moderate Regionally restricted euxassay_012529_09
TS23: stomach Moderate Regionally restricted euxassay_012529_09
Specimen euxassay_012529_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012529_10
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_10
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_10
TS23: tongue muscle Moderate Regionally restricted euxassay_012529_10
TS23: heart ventricle Moderate Spotted euxassay_012529_10
TS23: diaphragm Moderate Regionally restricted euxassay_012529_10
TS23: midgut Moderate Regionally restricted euxassay_012529_10
Specimen euxassay_012529_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012529_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_11
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_11
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012529_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012529_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012529_11
TS23: tongue muscle Moderate Regionally restricted euxassay_012529_11
TS23: heart ventricle Moderate Spotted euxassay_012529_11
TS23: diaphragm Moderate Regionally restricted euxassay_012529_11
TS23: midgut Moderate Regionally restricted euxassay_012529_11
Specimen euxassay_012529_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012529_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012529_12
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_12
TS23: medulla oblongata floor plate Moderate Regionally restricted euxassay_012529_12
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_12
TS23: metencephalon floor plate Moderate Regionally restricted euxassay_012529_12
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012529_12
TS23: tongue muscle Moderate Regionally restricted euxassay_012529_12
TS23: heart ventricle Moderate Spotted euxassay_012529_12
TS23: diaphragm Moderate Regionally restricted euxassay_012529_12
TS23: midgut Moderate Regionally restricted euxassay_012529_12
Specimen euxassay_012529_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012529_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_13
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_13
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012529_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012529_13
TS23: tongue muscle Moderate Regionally restricted euxassay_012529_13
TS23: heart ventricle Moderate Spotted euxassay_012529_13
TS23: diaphragm Moderate Regionally restricted euxassay_012529_13
TS23: midgut Moderate Regionally restricted euxassay_012529_13
Specimen euxassay_012529_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_14
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_14
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012529_14
TS23: heart ventricle Weak Regionally restricted euxassay_012529_14
TS23: diaphragm Moderate Regionally restricted euxassay_012529_14
TS23: midgut Moderate Regionally restricted euxassay_012529_14
Specimen euxassay_012529_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_15
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_15
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_15
TS23: midgut Moderate Regionally restricted euxassay_012529_15
Specimen euxassay_012529_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_16
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_16
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_16
TS23: midgut Moderate Regionally restricted euxassay_012529_16
Specimen euxassay_012529_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012529_17
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_17
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_17
TS23: midgut Moderate Regionally restricted euxassay_012529_17
Specimen euxassay_012529_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_18
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_18
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012529_18
Specimen euxassay_012529_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: choroid invagination Moderate Regionally restricted euxassay_012529_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_19
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_19
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_19
Specimen euxassay_012529_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_20
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_20
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_20
Specimen euxassay_012529_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012529_21
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_21
TS23: medulla oblongata part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_012529_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory