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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827062
Gene symbol: Pax2
Gene name: paired box 2
Probe: T36840
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012214_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_04
Specimen euxassay_012214_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_05
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_05
Specimen euxassay_012214_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_06
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_06
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_06
Specimen euxassay_012214_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_07
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012214_07
TS23: midbrain-hindbrain junction Present euxassay_012214_07
Specimen euxassay_012214_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_08
TS23: dorsal grey horn Strong Single cells euxassay_012214_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_08
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012214_08
TS23: midbrain-hindbrain junction Present euxassay_012214_08
Specimen euxassay_012214_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Single cells euxassay_012214_09
TS23: dorsal grey horn Strong Single cells euxassay_012214_09
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_012214_09
TS23: pons mantle layer Weak Regionally restricted euxassay_012214_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_09
Specimen euxassay_012214_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Single cells euxassay_012214_10
TS23: dorsal grey horn Strong Single cells euxassay_012214_10
TS23: pons mantle layer Weak Regionally restricted euxassay_012214_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_10
Specimen euxassay_012214_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Single cells euxassay_012214_11
TS23: dorsal grey horn Strong Single cells euxassay_012214_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012214_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_012214_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_11
Specimen euxassay_012214_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Single cells euxassay_012214_12
TS23: dorsal grey horn Strong Single cells euxassay_012214_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_12
Specimen euxassay_012214_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Strong Single cells euxassay_012214_13
TS23: dorsal grey horn Strong Single cells euxassay_012214_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012214_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_012214_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_13
Specimen euxassay_012214_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_14
TS23: ventral grey horn Strong Single cells euxassay_012214_14
TS23: dorsal grey horn Strong Single cells euxassay_012214_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_14
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012214_14
TS23: midbrain-hindbrain junction Present euxassay_012214_14
Specimen euxassay_012214_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_15
TS23: ventral grey horn Strong Single cells euxassay_012214_15
TS23: dorsal grey horn Strong Single cells euxassay_012214_15
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012214_15
TS23: midbrain-hindbrain junction Present euxassay_012214_15
Specimen euxassay_012214_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_16
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012214_16
TS23: midbrain-hindbrain junction Present euxassay_012214_16
Specimen euxassay_012214_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: renal cortex Strong Regionally restricted euxassay_012214_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_17
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_012214_17
Specimen euxassay_012214_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_012214_18
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_012214_18
Specimen euxassay_012214_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_19
Specimen euxassay_012214_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_012214_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory