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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826976
Gene symbol: Opcml
Gene name: opioid binding protein/cell adhesion molecule-like
Probe: T37329
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011103_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_03
Specimen euxassay_011103_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_04
Specimen euxassay_011103_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_05
Specimen euxassay_011103_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_06
Specimen euxassay_011103_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_07
TS23: facial ganglion Moderate Regionally restricted euxassay_011103_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_07
Specimen euxassay_011103_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_08
TS23: facial ganglion Moderate Regionally restricted euxassay_011103_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011103_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_08
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_08
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_08
Specimen euxassay_011103_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_09
TS23: facial ganglion Moderate Regionally restricted euxassay_011103_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011103_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_09
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_09
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_09
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_09
Specimen euxassay_011103_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_10
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_10
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_10
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_10
Specimen euxassay_011103_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_11
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011103_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_11
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_11
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_11
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_11
Specimen euxassay_011103_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011103_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_12
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_12
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_011103_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_12
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_12
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_12
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_12
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_12
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_12
Specimen euxassay_011103_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_13
TS23: epithalamus Strong Regionally restricted euxassay_011103_13
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_011103_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_13
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_13
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_13
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_13
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_13
Specimen euxassay_011103_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_14
TS23: tongue Moderate Spotted euxassay_011103_14
TS23: epithalamus Strong Regionally restricted euxassay_011103_14
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_011103_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_14
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_14
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_14
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_14
Specimen euxassay_011103_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_15
TS23: epithalamus Strong Regionally restricted euxassay_011103_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_15
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_15
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_15
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_15
Specimen euxassay_011103_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epithalamus Strong Regionally restricted euxassay_011103_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_16
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_16
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_16
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_16
Specimen euxassay_011103_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue Moderate Spotted euxassay_011103_17
TS23: epithalamus Strong Regionally restricted euxassay_011103_17
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_011103_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_17
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_17
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_17
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_17
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_17
Specimen euxassay_011103_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epithalamus Strong Regionally restricted euxassay_011103_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_18
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_011103_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_18
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_18
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_18
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_18
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_18
Specimen euxassay_011103_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011103_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_19
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_011103_19
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_19
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_19
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_19
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_19
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_19
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_19
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_011103_19
Specimen euxassay_011103_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_011103_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_20
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_20
TS23: olfactory cortex marginal layer Weak Regionally restricted euxassay_011103_20
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_20
TS23: midbrain mantle layer Weak Regionally restricted euxassay_011103_20
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_20
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_20
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_20
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_20
Specimen euxassay_011103_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_21
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011103_21
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_21
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_011103_21
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_21
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_21
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_011103_21
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_011103_21
Specimen euxassay_011103_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_22
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011103_22
TS23: facial ganglion Moderate Regionally restricted euxassay_011103_22
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011103_22
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_22
TS23: pons mantle layer Weak Regionally restricted euxassay_011103_22
Specimen euxassay_011103_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_23
TS23: facial ganglion Moderate Regionally restricted euxassay_011103_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_23
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_011103_23
Specimen euxassay_011103_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011103_24
TS23: facial ganglion Moderate Regionally restricted euxassay_011103_24
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_011103_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory