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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826973
Gene symbol: Onecut2
Gene name: one cut domain, family member 2
Probe: EN1302 probe 1189
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008992_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_008992_01
Specimen euxassay_008992_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008992_02
Specimen euxassay_008992_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008992_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_03
Specimen euxassay_008992_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008992_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_04
TS23: facial ganglion Moderate Regionally restricted euxassay_008992_04
Specimen euxassay_008992_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_05
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_008992_05
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_008992_05
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_05
Specimen euxassay_008992_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_06
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_06
Specimen euxassay_008992_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_07
TS23: ventral grey horn Moderate Regionally restricted euxassay_008992_07
Specimen euxassay_008992_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_008992_08
Specimen euxassay_008992_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_09
TS23: ventral grey horn Weak Regionally restricted euxassay_008992_09
Specimen euxassay_008992_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_10
TS23: ventral grey horn Weak Regionally restricted euxassay_008992_10
Specimen euxassay_008992_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_008992_11
Specimen euxassay_008992_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_008992_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_008992_12
Specimen euxassay_008992_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008992_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_13
Specimen euxassay_008992_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008992_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_14
Specimen euxassay_008992_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008992_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_15
Specimen euxassay_008992_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_008992_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008992_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_16
Specimen euxassay_008992_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008992_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008992_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_008992_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_008992_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008992_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008992_17
Specimen euxassay_008992_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_008992_18
TS23: pons mantle layer Weak Regionally restricted euxassay_008992_18
Specimen euxassay_008992_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_19
TS23: facial ganglion Moderate Regionally restricted euxassay_008992_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_008992_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008992_19
Specimen euxassay_008992_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_20
Specimen euxassay_008992_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_21
Specimen euxassay_008992_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008992_22
Specimen euxassay_008992_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008992_23
Specimen euxassay_008992_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008992_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory