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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826820
Gene symbol: Ntrk1
Gene name: neurotrophic tyrosine kinase, receptor, type 1
Probe: T36709
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007632_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_03
Specimen euxassay_007632_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_04
TS23: corpus striatum Moderate Single cells euxassay_007632_04
Specimen euxassay_007632_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_05
TS23: corpus striatum Moderate Single cells euxassay_007632_05
Specimen euxassay_007632_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_06
TS23: corpus striatum Moderate Single cells euxassay_007632_06
Specimen euxassay_007632_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007632_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007632_07
TS23: corpus striatum Moderate Single cells euxassay_007632_07
Specimen euxassay_007632_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007632_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_007632_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_08
TS23: corpus striatum Moderate Single cells euxassay_007632_08
Specimen euxassay_007632_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_007632_09
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_007632_09
TS23: corpus striatum Moderate Single cells euxassay_007632_09
TS23: rest of cerebellum mantle layer Moderate Single cells euxassay_007632_09
Specimen euxassay_007632_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_10
TS23: corpus striatum Moderate Single cells euxassay_007632_10
TS23: rest of cerebellum mantle layer Moderate Single cells euxassay_007632_10
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_10
Specimen euxassay_007632_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_11
TS23: rest of cerebellum mantle layer Moderate Single cells euxassay_007632_11
TS23: pons mantle layer Moderate Single cells euxassay_007632_11
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_11
Specimen euxassay_007632_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_007632_12
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_12
Specimen euxassay_007632_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Weak Regionally restricted euxassay_007632_13
TS23: corpus striatum Moderate Single cells euxassay_007632_13
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_007632_13
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_13
Specimen euxassay_007632_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: corpus striatum Moderate Single cells euxassay_007632_14
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_007632_14
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_14
Specimen euxassay_007632_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_15
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_007632_15
TS23: corpus striatum Moderate Single cells euxassay_007632_15
TS23: rest of cerebellum mantle layer Moderate Single cells euxassay_007632_15
TS23: pons mantle layer Moderate Single cells euxassay_007632_15
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_15
Specimen euxassay_007632_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_16
TS23: cervical ganglion Moderate Regionally restricted euxassay_007632_16
TS23: corpus striatum Moderate Single cells euxassay_007632_16
TS23: rest of cerebellum mantle layer Moderate Single cells euxassay_007632_16
TS23: pons mantle layer Weak Single cells euxassay_007632_16
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_16
Specimen euxassay_007632_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_007632_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_17
TS23: corpus striatum Moderate Single cells euxassay_007632_17
TS23: rest of cerebellum mantle layer Moderate Single cells euxassay_007632_17
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_17
Specimen euxassay_007632_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007632_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_18
TS23: corpus striatum Moderate Single cells euxassay_007632_18
TS23: rest of cerebellum mantle layer Weak Single cells euxassay_007632_18
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_18
Specimen euxassay_007632_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007632_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007632_19
TS23: corpus striatum Moderate Single cells euxassay_007632_19
TS23: rest of cerebellum mantle layer Weak Single cells euxassay_007632_19
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_19
Specimen euxassay_007632_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_20
TS23: corpus striatum Moderate Single cells euxassay_007632_20
TS23: midbrain mantle layer Moderate Single cells euxassay_007632_20
Specimen euxassay_007632_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_21
Specimen euxassay_007632_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007632_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory