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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826783
Gene symbol: Nr2e1
Gene name: nuclear receptor subfamily 2, group E, member 1
Probe: MH806 probe 711
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007249_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007249_01
Specimen euxassay_007249_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007249_02
Specimen euxassay_007249_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007249_03
Specimen euxassay_007249_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007249_04
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_04
Specimen euxassay_007249_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_05
Specimen euxassay_007249_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_06
Specimen euxassay_007249_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_07
Specimen euxassay_007249_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_007249_08
Specimen euxassay_007249_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_007249_09
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_09
Specimen euxassay_007249_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_007249_10
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_10
Specimen euxassay_007249_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_11
Specimen euxassay_007249_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_12
Specimen euxassay_007249_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Strong Uniform euxassay_007249_13
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_007249_13
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_13
TS23: heart ventricle Moderate Spotted euxassay_007249_13
Specimen euxassay_007249_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Strong Uniform euxassay_007249_14
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_007249_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_14
TS23: heart ventricle Moderate Spotted euxassay_007249_14
Specimen euxassay_007249_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_007249_15
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_15
TS23: hypothalamus ventricular layer Strong Uniform euxassay_007249_15
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_007249_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_15
TS23: heart ventricle Moderate Spotted euxassay_007249_15
Specimen euxassay_007249_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_007249_16
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_16
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_007249_16
TS23: hypothalamus ventricular layer Strong Uniform euxassay_007249_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_16
TS23: heart ventricle Moderate Spotted euxassay_007249_16
Specimen euxassay_007249_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_17
TS23: hypothalamus ventricular layer Strong Uniform euxassay_007249_17
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_007249_17
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_007249_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007249_17
TS23: heart ventricle Moderate Spotted euxassay_007249_17
Specimen euxassay_007249_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_18
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_007249_18
TS23: heart ventricle Moderate Spotted euxassay_007249_18
Specimen euxassay_007249_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_19
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_19
TS23: heart ventricle Moderate Spotted euxassay_007249_19
Specimen euxassay_007249_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_20
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_20
TS23: heart ventricle Moderate Spotted euxassay_007249_20
Specimen euxassay_007249_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_21
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_21
TS23: heart ventricle Moderate Spotted euxassay_007249_21
Specimen euxassay_007249_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_22
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_22
Specimen euxassay_007249_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_23
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_007249_23
Specimen euxassay_007249_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_007249_24
TS23: telencephalon ventricular layer Strong Uniform euxassay_007249_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory