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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826699
Gene symbol: Ngfr
Gene name: nerve growth factor receptor (TNFR superfamily, member 16)
Probe: T30242
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010406_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_01
TS23: diaphragm Moderate Regionally restricted euxassay_010406_01
Specimen euxassay_010406_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_02
TS23: diaphragm Moderate Regionally restricted euxassay_010406_02
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_02
TS23: neural retina Moderate Regionally restricted euxassay_010406_02
Specimen euxassay_010406_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_03
TS23: diaphragm Moderate Regionally restricted euxassay_010406_03
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_03
TS23: neural retina Moderate Regionally restricted euxassay_010406_03
Specimen euxassay_010406_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_04
TS23: facial ganglion Strong Regionally restricted euxassay_010406_04
TS23: diaphragm Moderate Regionally restricted euxassay_010406_04
TS23: vibrissa Moderate Regionally restricted euxassay_010406_04
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_04
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_04
TS23: neural retina Moderate Regionally restricted euxassay_010406_04
Specimen euxassay_010406_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_05
TS23: facial ganglion Strong Regionally restricted euxassay_010406_05
TS23: diaphragm Moderate Regionally restricted euxassay_010406_05
TS23: vibrissa Moderate Regionally restricted euxassay_010406_05
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_05
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_05
Specimen euxassay_010406_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_06
TS23: facial ganglion Strong Regionally restricted euxassay_010406_06
TS23: diaphragm Moderate Regionally restricted euxassay_010406_06
TS23: vibrissa Moderate Regionally restricted euxassay_010406_06
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_06
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_06
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_06
Specimen euxassay_010406_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010406_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010406_07
TS23: diaphragm Moderate Regionally restricted euxassay_010406_07
TS23: vibrissa Moderate Regionally restricted euxassay_010406_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_07
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_07
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_07
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_07
Specimen euxassay_010406_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010406_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010406_08
TS23: diaphragm Weak Regionally restricted euxassay_010406_08
TS23: vibrissa Moderate Regionally restricted euxassay_010406_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_08
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_08
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_08
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_08
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_010406_08 trigeminal motor nucleus
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_010406_08
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_08
Specimen euxassay_010406_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_09
TS23: diaphragm Weak Regionally restricted euxassay_010406_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_09
TS23: spinal cord meninges Weak Regionally restricted euxassay_010406_09
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_09
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_09
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_09
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010406_09 facial motor nucleus
TS23: medulla oblongata basal plate Moderate Single cells euxassay_010406_09
TS23: medulla oblongata alar plate Moderate Single cells euxassay_010406_09
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_09
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_09
Specimen euxassay_010406_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_10
TS23: spinal cord meninges Weak Regionally restricted euxassay_010406_10
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_10
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_10
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_10
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_10
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_010406_10
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_10
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_10
Specimen euxassay_010406_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_11
TS23: spinal cord meninges Weak Regionally restricted euxassay_010406_11
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_11
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_11
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_11
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_11
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_010406_11
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_11
TS23: tongue Weak Regionally restricted euxassay_010406_11
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_11
Specimen euxassay_010406_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_12
TS23: spinal cord meninges Weak Regionally restricted euxassay_010406_12
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_12
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_12
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_12
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_12
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_010406_12
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_12
TS23: tongue Weak Regionally restricted euxassay_010406_12
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_12
TS23: tail mesenchyme Moderate Regionally restricted euxassay_010406_12
Specimen euxassay_010406_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_13
TS23: spinal cord meninges Weak Regionally restricted euxassay_010406_13
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_13
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_13
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_13
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_13
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_010406_13
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_13
TS23: tongue Moderate Regionally restricted euxassay_010406_13
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_13
TS23: tail mesenchyme Moderate Regionally restricted euxassay_010406_13
Specimen euxassay_010406_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_14
TS23: spinal cord meninges Weak Regionally restricted euxassay_010406_14
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_14
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_14
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_14
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010406_14 facial motor nucleus
TS23: medulla oblongata basal plate Moderate Single cells euxassay_010406_14
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_14
TS23: tongue Moderate Regionally restricted euxassay_010406_14
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_010406_14
Specimen euxassay_010406_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_15
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_15
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_15
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_15
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010406_15 facial motor nucleus
TS23: medulla oblongata basal plate Moderate Single cells euxassay_010406_15
TS23: ventral grey horn Strong Regionally restricted euxassay_010406_15
TS23: tongue Weak Regionally restricted euxassay_010406_15
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_15
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_15
Specimen euxassay_010406_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_16
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010406_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010406_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_010406_16
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_16
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_16
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_16
TS23: diencephalon meninges Weak Regionally restricted euxassay_010406_16
TS23: tongue Weak Regionally restricted euxassay_010406_16
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_16
Specimen euxassay_010406_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010406_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010406_17
TS23: diaphragm Weak Regionally restricted euxassay_010406_17
TS23: midbrain meninges Moderate Regionally restricted euxassay_010406_17
TS23: hindbrain meninges Moderate Regionally restricted euxassay_010406_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_010406_17
TS23: diencephalon meninges Moderate Regionally restricted euxassay_010406_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_010406_17 trigeminal motor nucleus
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_17
Specimen euxassay_010406_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_010406_18
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_010406_18
TS23: diaphragm Moderate Regionally restricted euxassay_010406_18
TS23: vibrissa Moderate Regionally restricted euxassay_010406_18
TS23: midbrain meninges Moderate Regionally restricted euxassay_010406_18
TS23: hindbrain meninges Moderate Regionally restricted euxassay_010406_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_010406_18
TS23: diencephalon meninges Moderate Regionally restricted euxassay_010406_18
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_18
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_18
Specimen euxassay_010406_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_19
TS23: facial ganglion Strong Regionally restricted euxassay_010406_19
TS23: diaphragm Moderate Regionally restricted euxassay_010406_19
TS23: vibrissa Moderate Regionally restricted euxassay_010406_19
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_19
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_19
TS23: midbrain meninges Weak Regionally restricted euxassay_010406_19
TS23: 4th ventricle Moderate Regionally restricted euxassay_010406_19
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_19
Specimen euxassay_010406_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_20
TS23: facial ganglion Strong Regionally restricted euxassay_010406_20
TS23: diaphragm Moderate Regionally restricted euxassay_010406_20
TS23: vibrissa Moderate Regionally restricted euxassay_010406_20
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_20
TS23: hindbrain meninges Weak Regionally restricted euxassay_010406_20
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_20
Specimen euxassay_010406_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_21
TS23: diaphragm Moderate Regionally restricted euxassay_010406_21
TS23: vibrissa Moderate Regionally restricted euxassay_010406_21
TS23: telencephalon meninges Weak Regionally restricted euxassay_010406_21
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_21
Specimen euxassay_010406_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_010406_22
TS23: diaphragm Moderate Regionally restricted euxassay_010406_22
TS23: vibrissa Moderate Regionally restricted euxassay_010406_22
TS23: telencephalon meninges Moderate Regionally restricted euxassay_010406_22
TS23: tail mesenchyme Weak Regionally restricted euxassay_010406_22
Specimen euxassay_010406_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_010406_23
TS23: diaphragm Moderate Regionally restricted euxassay_010406_23
TS23: vibrissa Moderate Regionally restricted euxassay_010406_23
TS23: telencephalon meninges Moderate Regionally restricted euxassay_010406_23
TS23: neural retina Moderate Regionally restricted euxassay_010406_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory