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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826689
Gene symbol: Nfil3
Gene name: nuclear factor, interleukin 3, regulated
Probe: MGC clone 31040
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002657_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_01
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_01
Specimen euxassay_002657_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_02
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_02
Specimen euxassay_002657_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_03
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_03
Specimen euxassay_002657_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_04
Specimen euxassay_002657_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_05
TS23: hindbrain Moderate Uniform euxassay_002657_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002657_05
Specimen euxassay_002657_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_06
TS23: spinal cord Moderate Uniform euxassay_002657_06
TS23: hindbrain Moderate Uniform euxassay_002657_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002657_06
Specimen euxassay_002657_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_07
TS23: midbrain Moderate Uniform euxassay_002657_07
TS23: hindbrain Moderate Uniform euxassay_002657_07
TS23: spinal cord Moderate Uniform euxassay_002657_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_002657_07
Specimen euxassay_002657_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_08
TS23: spinal cord Moderate Uniform euxassay_002657_08
TS23: midbrain Moderate Uniform euxassay_002657_08
TS23: hindbrain Moderate Uniform euxassay_002657_08
TS23: diencephalon Moderate Uniform euxassay_002657_08
Specimen euxassay_002657_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_09
TS23: spinal cord Moderate Uniform euxassay_002657_09
TS23: midbrain Moderate Uniform euxassay_002657_09
TS23: hindbrain Moderate Uniform euxassay_002657_09
TS23: diencephalon Moderate Uniform euxassay_002657_09
Specimen euxassay_002657_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_10
TS23: spinal cord Moderate Uniform euxassay_002657_10
TS23: midbrain Moderate Uniform euxassay_002657_10
TS23: hindbrain Moderate Uniform euxassay_002657_10
TS23: diencephalon Moderate Uniform euxassay_002657_10
Specimen euxassay_002657_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_11
TS23: spinal cord Moderate Uniform euxassay_002657_11
TS23: midbrain Moderate Uniform euxassay_002657_11
TS23: hindbrain Moderate Uniform euxassay_002657_11
TS23: diencephalon Moderate Uniform euxassay_002657_11
Specimen euxassay_002657_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_12
TS23: spinal cord Moderate Uniform euxassay_002657_12
TS23: midbrain Moderate Uniform euxassay_002657_12
TS23: hindbrain Moderate Uniform euxassay_002657_12
TS23: diencephalon Moderate Uniform euxassay_002657_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002657_12
Specimen euxassay_002657_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_13
TS23: spinal cord Moderate Uniform euxassay_002657_13
TS23: midbrain Moderate Uniform euxassay_002657_13
TS23: hindbrain Moderate Uniform euxassay_002657_13
TS23: diencephalon Moderate Uniform euxassay_002657_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002657_13
Specimen euxassay_002657_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_14
TS23: spinal cord Moderate Uniform euxassay_002657_14
TS23: midbrain Moderate Uniform euxassay_002657_14
TS23: hindbrain Moderate Uniform euxassay_002657_14
TS23: diencephalon Moderate Uniform euxassay_002657_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002657_14
Specimen euxassay_002657_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_15
TS23: midbrain Moderate Uniform euxassay_002657_15
TS23: hindbrain Moderate Uniform euxassay_002657_15
TS23: diencephalon Moderate Uniform euxassay_002657_15
TS23: spinal cord Moderate Uniform euxassay_002657_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_002657_15
Specimen euxassay_002657_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_002657_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_16
TS23: midbrain Moderate Uniform euxassay_002657_16
TS23: hindbrain Moderate Uniform euxassay_002657_16
TS23: diencephalon Moderate Uniform euxassay_002657_16
Specimen euxassay_002657_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_17
TS23: midbrain Moderate Uniform euxassay_002657_17
TS23: hindbrain Moderate Uniform euxassay_002657_17
TS23: diencephalon Moderate Uniform euxassay_002657_17
Specimen euxassay_002657_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_18
TS23: hindbrain Moderate Uniform euxassay_002657_18
TS23: midbrain Moderate Uniform euxassay_002657_18
TS23: diencephalon Moderate Uniform euxassay_002657_18
Specimen euxassay_002657_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_002657_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_19
TS23: midbrain Moderate Uniform euxassay_002657_19
TS23: hindbrain Moderate Uniform euxassay_002657_19
TS23: diencephalon Moderate Uniform euxassay_002657_19
Specimen euxassay_002657_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_20
TS23: hindbrain Moderate Uniform euxassay_002657_20
TS23: midbrain Moderate Uniform euxassay_002657_20
Specimen euxassay_002657_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_21
TS23: hindbrain Moderate Uniform euxassay_002657_21
Specimen euxassay_002657_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_22
TS23: hindbrain Moderate Uniform euxassay_002657_22
Specimen euxassay_002657_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002657_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_002657_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_002657_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory