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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826657
Gene symbol: Nedd9
Gene name: neural precursor cell expressed, developmentally down-regulated gene 9
Probe: MGC clone 60511
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006351_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_01
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_01
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_01
TS23: retina Strong Regionally restricted euxassay_006351_01
TS23: stomach Moderate Regionally restricted euxassay_006351_01
TS23: upper arm mesenchyme Strong Regionally restricted euxassay_006351_01
TS23: forearm mesenchyme Strong Regionally restricted euxassay_006351_01
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_006351_01
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_006351_01
Specimen euxassay_006351_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_02
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_02
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_02
TS23: retina Strong Regionally restricted euxassay_006351_02
TS23: stomach Moderate Regionally restricted euxassay_006351_02
TS23: forearm mesenchyme Strong Regionally restricted euxassay_006351_02
TS23: upper arm mesenchyme Strong Regionally restricted euxassay_006351_02
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_006351_02
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_006351_02
Specimen euxassay_006351_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_03
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_03
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_03
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_03
TS23: retina Strong Regionally restricted euxassay_006351_03
TS23: left lung Strong Regionally restricted euxassay_006351_03
TS23: stomach Moderate Regionally restricted euxassay_006351_03
TS23: forelimb digit 1 mesenchyme Strong Regionally restricted euxassay_006351_03
TS23: forelimb digit 2 mesenchyme Strong Regionally restricted euxassay_006351_03
TS23: forelimb digit 3 mesenchyme Strong Regionally restricted euxassay_006351_03
TS23: foot mesenchyme Strong Regionally restricted euxassay_006351_03
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_006351_03
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_006351_03
Specimen euxassay_006351_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_04
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_04
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_04
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_04
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_04
TS23: retina Strong Regionally restricted euxassay_006351_04
TS23: vibrissa Strong Regionally restricted euxassay_006351_04
TS23: left lung Strong Regionally restricted euxassay_006351_04
TS23: stomach Moderate Regionally restricted euxassay_006351_04
TS23: renal cortex Moderate Regionally restricted euxassay_006351_04
TS23: forelimb digit 1 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: forelimb digit 2 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: forelimb digit 3 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: hindlimb digit 1 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: hindlimb digit 5 mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: foot mesenchyme Strong Regionally restricted euxassay_006351_04
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_006351_04
Specimen euxassay_006351_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_05
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_05
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_05
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_05
TS23: retina Strong Regionally restricted euxassay_006351_05
TS23: left lung Strong Regionally restricted euxassay_006351_05
TS23: stomach Moderate Regionally restricted euxassay_006351_05
TS23: renal cortex Moderate Regionally restricted euxassay_006351_05
TS23: forelimb digit 1 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: forelimb digit 2 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: forelimb digit 3 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: hindlimb digit 1 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: hindlimb digit 5 mesenchyme Strong Regionally restricted euxassay_006351_05
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_006351_05
Specimen euxassay_006351_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_06
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_06
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_06
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006351_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_06
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_06
TS23: vibrissa Strong Regionally restricted euxassay_006351_06
TS23: left lung Strong Regionally restricted euxassay_006351_06
TS23: stomach Moderate Regionally restricted euxassay_006351_06
TS23: renal calyx Moderate Regionally restricted euxassay_006351_06
TS23: renal pelvis Moderate Regionally restricted euxassay_006351_06
TS23: renal cortex Moderate Regionally restricted euxassay_006351_06
TS23: hindlimb digit 1 mesenchyme Strong Regionally restricted euxassay_006351_06
TS23: hindlimb digit 2 mesenchyme Strong Regionally restricted euxassay_006351_06
TS23: hindlimb digit 3 mesenchyme Strong Regionally restricted euxassay_006351_06
TS23: hindlimb digit 4 mesenchyme Strong Regionally restricted euxassay_006351_06
TS23: hindlimb digit 5 mesenchyme Strong Regionally restricted euxassay_006351_06
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_006351_06
Specimen euxassay_006351_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_006351_07
TS23: vibrissa Strong Regionally restricted euxassay_006351_07
TS23: lower jaw molar Strong Regionally restricted euxassay_006351_07
TS23: upper jaw molar Strong Regionally restricted euxassay_006351_07
TS23: left lung Strong Regionally restricted euxassay_006351_07
TS23: stomach Moderate Regionally restricted euxassay_006351_07
TS23: renal cortex Moderate Regionally restricted euxassay_006351_07
TS23: renal calyx Moderate Regionally restricted euxassay_006351_07
Specimen euxassay_006351_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_006351_08
TS23: vibrissa Strong Regionally restricted euxassay_006351_08
TS23: lower jaw molar Strong Regionally restricted euxassay_006351_08
TS23: upper jaw molar Strong Regionally restricted euxassay_006351_08
TS23: left lung Strong Regionally restricted euxassay_006351_08
TS23: stomach Moderate Regionally restricted euxassay_006351_08
TS23: midgut Moderate Regionally restricted euxassay_006351_08
Specimen euxassay_006351_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_006351_09
TS23: vibrissa Strong Regionally restricted euxassay_006351_09
TS23: left lung Strong Regionally restricted euxassay_006351_09
TS23: midgut Moderate Regionally restricted euxassay_006351_09
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_09
TS23: aorta Strong Regionally restricted euxassay_006351_09
TS23: thymus primordium Strong Regionally restricted euxassay_006351_09
TS23: thyroid gland Strong Regionally restricted euxassay_006351_09
Specimen euxassay_006351_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_006351_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_006351_10
TS23: vibrissa Strong Regionally restricted euxassay_006351_10
TS23: left lung Strong Regionally restricted euxassay_006351_10
TS23: midgut Moderate Regionally restricted euxassay_006351_10
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_10
TS23: thymus primordium Strong Regionally restricted euxassay_006351_10
TS23: sternum Strong Regionally restricted euxassay_006351_10
Specimen euxassay_006351_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_006351_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_006351_11
TS23: vibrissa Strong Regionally restricted euxassay_006351_11
TS23: right lung Strong Regionally restricted euxassay_006351_11
TS23: left lung Strong Regionally restricted euxassay_006351_11
TS23: midgut Moderate Regionally restricted euxassay_006351_11
TS23: rectum Moderate Regionally restricted euxassay_006351_11
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_11
TS23: trachea Strong Regionally restricted euxassay_006351_11
TS23: aorta Strong Regionally restricted euxassay_006351_11
TS23: sternum Strong Regionally restricted euxassay_006351_11
Specimen euxassay_006351_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006351_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_12
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_12
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_12
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_006351_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_006351_12
TS23: right lung Strong Regionally restricted euxassay_006351_12
TS23: midgut Moderate Regionally restricted euxassay_006351_12
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_12
TS23: thymus primordium Strong Regionally restricted euxassay_006351_12
TS23: aorta Strong Regionally restricted euxassay_006351_12
TS23: sternum Strong Regionally restricted euxassay_006351_12
Specimen euxassay_006351_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006351_13
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_13
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_13
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_13
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006351_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_006351_13
TS23: vomeronasal organ Strong Regionally restricted euxassay_006351_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_006351_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_006351_13
TS23: right lung Strong Regionally restricted euxassay_006351_13
TS23: midgut Moderate Regionally restricted euxassay_006351_13
TS23: renal cortex Moderate Regionally restricted euxassay_006351_13
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_13
TS23: thyroid gland Strong Regionally restricted euxassay_006351_13
TS23: thymus primordium Strong Regionally restricted euxassay_006351_13
TS23: aorta Strong Regionally restricted euxassay_006351_13
TS23: sternum Strong Regionally restricted euxassay_006351_13
Specimen euxassay_006351_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_006351_14
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_006351_14
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_006351_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_14
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_14
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006351_14
TS23: external naris epithelium Strong Regionally restricted euxassay_006351_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_006351_14
TS23: upper jaw incisor Strong Regionally restricted euxassay_006351_14
TS23: right lung Strong Regionally restricted euxassay_006351_14
TS23: midgut Moderate Regionally restricted euxassay_006351_14
TS23: renal calyx Moderate Regionally restricted euxassay_006351_14
TS23: ureter Moderate Regionally restricted euxassay_006351_14
TS23: renal cortex Moderate Regionally restricted euxassay_006351_14
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_14
TS23: sternum Strong Regionally restricted euxassay_006351_14
Specimen euxassay_006351_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_15
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_15
TS23: anterior naris epithelium Strong Regionally restricted euxassay_006351_15
TS23: right lung Strong Regionally restricted euxassay_006351_15
TS23: midgut Moderate Regionally restricted euxassay_006351_15
TS23: renal cortex Moderate Regionally restricted euxassay_006351_15
TS23: tail mesenchyme Strong Regionally restricted euxassay_006351_15
Specimen euxassay_006351_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_006351_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_006351_16
TS23: pons ventricular layer Strong Regionally restricted euxassay_006351_16
TS23: vomeronasal organ Strong Regionally restricted euxassay_006351_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_006351_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_006351_16
TS23: right lung Strong Regionally restricted euxassay_006351_16
TS23: midgut Moderate Regionally restricted euxassay_006351_16
TS23: renal cortex Moderate Regionally restricted euxassay_006351_16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory