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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826639
Gene symbol: Ndufa9
Gene name: NADH:ubiquinone oxidoreductase subunit A9
Probe: T50707
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018912_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018912_01
TS23: liver Weak Regionally restricted euxassay_018912_01
TS23: stomach Weak Regionally restricted euxassay_018912_01
TS23: neural retina Weak Regionally restricted euxassay_018912_01
Specimen euxassay_018912_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_02
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018912_02
TS23: liver Weak Regionally restricted euxassay_018912_02
TS23: mandible Weak Regionally restricted euxassay_018912_02
TS23: stomach Weak Regionally restricted euxassay_018912_02
TS23: neural retina Weak Regionally restricted euxassay_018912_02
Specimen euxassay_018912_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_03
TS23: facial ganglion Weak Regionally restricted euxassay_018912_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_018912_03
TS23: liver Weak Regionally restricted euxassay_018912_03
TS23: mandible Weak Regionally restricted euxassay_018912_03
TS23: lung Weak Regionally restricted euxassay_018912_03
TS23: stomach Weak Regionally restricted euxassay_018912_03
Specimen euxassay_018912_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_04
TS23: facial ganglion Weak Regionally restricted euxassay_018912_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_018912_04
TS23: liver Weak Regionally restricted euxassay_018912_04
TS23: mandible Weak Regionally restricted euxassay_018912_04
TS23: lung Weak Regionally restricted euxassay_018912_04
TS23: axial musculature Weak Regionally restricted euxassay_018912_04
TS23: stomach Weak Regionally restricted euxassay_018912_04
Specimen euxassay_018912_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_05
TS23: vibrissa Weak Regionally restricted euxassay_018912_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018912_05
TS23: liver Weak Regionally restricted euxassay_018912_05
TS23: mandible Weak Regionally restricted euxassay_018912_05
TS23: maxilla Weak Regionally restricted euxassay_018912_05
TS23: lung Weak Regionally restricted euxassay_018912_05
TS23: axial musculature Weak Regionally restricted euxassay_018912_05
TS23: testis Weak Regionally restricted euxassay_018912_05
TS23: stomach Weak Regionally restricted euxassay_018912_05
Specimen euxassay_018912_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_06
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_018912_06
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_06
TS23: vibrissa Weak Regionally restricted euxassay_018912_06
TS23: pons mantle layer Weak Regionally restricted euxassay_018912_06 trigeminal motor nucleus
TS23: liver Weak Regionally restricted euxassay_018912_06
TS23: maxilla Weak Regionally restricted euxassay_018912_06
TS23: mandible Weak Regionally restricted euxassay_018912_06
TS23: lung Weak Regionally restricted euxassay_018912_06
TS23: axial musculature Weak Regionally restricted euxassay_018912_06
TS23: testis Weak Regionally restricted euxassay_018912_06
TS23: stomach Weak Regionally restricted euxassay_018912_06
TS23: midgut Weak Regionally restricted euxassay_018912_06
Specimen euxassay_018912_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_018912_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_07
TS23: vibrissa Weak Regionally restricted euxassay_018912_07
TS23: liver Weak Regionally restricted euxassay_018912_07
TS23: maxilla Weak Regionally restricted euxassay_018912_07
TS23: mandible Weak Regionally restricted euxassay_018912_07
TS23: lung Weak Regionally restricted euxassay_018912_07
TS23: axial musculature Weak Regionally restricted euxassay_018912_07
TS23: testis Weak Regionally restricted euxassay_018912_07
TS23: midgut Weak Regionally restricted euxassay_018912_07
TS23: stomach Weak Regionally restricted euxassay_018912_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_07
Specimen euxassay_018912_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_08
TS23: vibrissa Weak Regionally restricted euxassay_018912_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018912_08 facial motor nucleus
TS23: liver Weak Regionally restricted euxassay_018912_08
TS23: mandible Weak Regionally restricted euxassay_018912_08
TS23: maxilla Weak Regionally restricted euxassay_018912_08
TS23: pancreas Weak Regionally restricted euxassay_018912_08
TS23: lung Weak Regionally restricted euxassay_018912_08
TS23: stomach Weak Regionally restricted euxassay_018912_08
TS23: midgut Weak Regionally restricted euxassay_018912_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_08
Specimen euxassay_018912_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018912_09 facial motor nucleus
TS23: liver Weak Regionally restricted euxassay_018912_09
TS23: mandible Weak Regionally restricted euxassay_018912_09
TS23: maxilla Weak Regionally restricted euxassay_018912_09
TS23: pancreas Weak Regionally restricted euxassay_018912_09
TS23: lung Weak Regionally restricted euxassay_018912_09
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_09
TS23: midgut Weak Regionally restricted euxassay_018912_09
TS23: stomach Weak Regionally restricted euxassay_018912_09
TS23: clavicle Weak Regionally restricted euxassay_018912_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_09
Specimen euxassay_018912_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_018912_10
TS23: mandible Weak Regionally restricted euxassay_018912_10
TS23: pancreas Weak Regionally restricted euxassay_018912_10
TS23: thymus primordium Weak Regionally restricted euxassay_018912_10
TS23: thyroid gland Weak Regionally restricted euxassay_018912_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_018912_10
TS23: lung Weak Regionally restricted euxassay_018912_10
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_10
TS23: midgut Weak Regionally restricted euxassay_018912_10
TS23: clavicle Weak Regionally restricted euxassay_018912_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_10
Specimen euxassay_018912_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_018912_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_018912_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_018912_11
TS23: mandible Weak Regionally restricted euxassay_018912_11
TS23: pancreas Weak Regionally restricted euxassay_018912_11
TS23: thymus primordium Weak Regionally restricted euxassay_018912_11
TS23: thyroid gland Weak Regionally restricted euxassay_018912_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_018912_11
TS23: lung Weak Regionally restricted euxassay_018912_11
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_11
TS23: midgut Weak Regionally restricted euxassay_018912_11
Specimen euxassay_018912_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_018912_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_018912_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_018912_12
TS23: pancreas Weak Regionally restricted euxassay_018912_12
TS23: thymus primordium Weak Regionally restricted euxassay_018912_12
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_12
TS23: midgut Weak Regionally restricted euxassay_018912_12
TS23: hindgut Weak Regionally restricted euxassay_018912_12
Specimen euxassay_018912_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Regionally restricted euxassay_018912_13
TS23: pancreas Weak Regionally restricted euxassay_018912_13
TS23: thymus primordium Weak Regionally restricted euxassay_018912_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_018912_13
TS23: lung Weak Regionally restricted euxassay_018912_13
TS23: midgut Weak Regionally restricted euxassay_018912_13
TS23: stomach Weak Regionally restricted euxassay_018912_13
Specimen euxassay_018912_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018912_14 facial motor nucleus
TS23: liver Weak Regionally restricted euxassay_018912_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_018912_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_018912_14
TS23: mandible Weak Regionally restricted euxassay_018912_14
TS23: pancreas Weak Regionally restricted euxassay_018912_14
TS23: thymus primordium Weak Regionally restricted euxassay_018912_14
TS23: thyroid gland Weak Regionally restricted euxassay_018912_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_018912_14
TS23: lung Weak Regionally restricted euxassay_018912_14
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_14
TS23: midgut Weak Regionally restricted euxassay_018912_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_14
Specimen euxassay_018912_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018912_15 facial motor nucleus
TS23: liver Weak Regionally restricted euxassay_018912_15
TS23: maxilla Weak Regionally restricted euxassay_018912_15
TS23: mandible Weak Regionally restricted euxassay_018912_15
TS23: pancreas Weak Regionally restricted euxassay_018912_15
TS23: lung Weak Regionally restricted euxassay_018912_15
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_15
TS23: midgut Weak Regionally restricted euxassay_018912_15
TS23: clavicle Weak Regionally restricted euxassay_018912_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_15
Specimen euxassay_018912_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_16
TS23: vagus ganglion Weak Regionally restricted euxassay_018912_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_16
TS23: pons mantle layer Weak Regionally restricted euxassay_018912_16 trigeminal motor nucleus
TS23: liver Weak Regionally restricted euxassay_018912_16
TS23: maxilla Weak Regionally restricted euxassay_018912_16
TS23: mandible Weak Regionally restricted euxassay_018912_16
TS23: lung Weak Regionally restricted euxassay_018912_16
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_018912_16
TS23: midgut Weak Regionally restricted euxassay_018912_16
TS23: clavicle Weak Regionally restricted euxassay_018912_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_16
Specimen euxassay_018912_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_17
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_018912_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_17
TS23: liver Weak Regionally restricted euxassay_018912_17
TS23: maxilla Weak Regionally restricted euxassay_018912_17
TS23: mandible Weak Regionally restricted euxassay_018912_17
TS23: lung Weak Regionally restricted euxassay_018912_17
TS23: midgut Weak Regionally restricted euxassay_018912_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018912_17
Specimen euxassay_018912_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_18
TS23: facial ganglion Weak Regionally restricted euxassay_018912_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_018912_18
TS23: liver Weak Regionally restricted euxassay_018912_18
TS23: maxilla Weak Regionally restricted euxassay_018912_18
TS23: mandible Weak Regionally restricted euxassay_018912_18
TS23: lung Weak Regionally restricted euxassay_018912_18
TS23: axial musculature Weak Regionally restricted euxassay_018912_18
TS23: testis Weak Regionally restricted euxassay_018912_18
TS23: midgut Weak Regionally restricted euxassay_018912_18
Specimen euxassay_018912_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_19
TS23: facial ganglion Weak Regionally restricted euxassay_018912_19
TS23: vibrissa Weak Regionally restricted euxassay_018912_19
TS23: liver Weak Regionally restricted euxassay_018912_19
TS23: maxilla Weak Regionally restricted euxassay_018912_19
TS23: mandible Weak Regionally restricted euxassay_018912_19
TS23: lung Weak Regionally restricted euxassay_018912_19
TS23: axial musculature Weak Regionally restricted euxassay_018912_19
Specimen euxassay_018912_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_20
TS23: vibrissa Weak Regionally restricted euxassay_018912_20
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018912_20
TS23: liver Weak Regionally restricted euxassay_018912_20
TS23: mandible Weak Regionally restricted euxassay_018912_20
TS23: maxilla Weak Regionally restricted euxassay_018912_20
TS23: lung Weak Regionally restricted euxassay_018912_20
TS23: axial musculature Weak Regionally restricted euxassay_018912_20
TS23: testis Weak Regionally restricted euxassay_018912_20
Specimen euxassay_018912_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_018912_21
TS23: vibrissa Weak Regionally restricted euxassay_018912_21
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018912_21
TS23: liver Weak Regionally restricted euxassay_018912_21
TS23: mandible Weak Regionally restricted euxassay_018912_21
TS23: lung Weak Regionally restricted euxassay_018912_21
TS23: axial musculature Weak Regionally restricted euxassay_018912_21
Specimen euxassay_018912_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018912_22
TS23: liver Weak Regionally restricted euxassay_018912_22
TS23: neural retina Weak Regionally restricted euxassay_018912_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory