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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826609
Gene symbol: Ncam1
Gene name: neural cell adhesion molecule 1
Probe: T39423
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014138_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_014138_01
TS23: neural retina Strong Regionally restricted euxassay_014138_01
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_01
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_014138_01
TS23: upper arm muscle Weak Regionally restricted euxassay_014138_01
TS23: forearm rest of mesenchyme Weak Regionally restricted euxassay_014138_01
Specimen euxassay_014138_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_014138_02
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_02
TS23: neural retina Strong Regionally restricted euxassay_014138_02
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_02
TS23: diaphragm Weak Regionally restricted euxassay_014138_02
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_014138_02
TS23: forearm rest of mesenchyme Weak Regionally restricted euxassay_014138_02
TS23: upper arm rest of mesenchyme Weak Regionally restricted euxassay_014138_02
TS23: hand Weak Regionally restricted euxassay_014138_02
Specimen euxassay_014138_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_03
TS23: facial ganglion Strong Regionally restricted euxassay_014138_03
TS23: neural retina Strong Regionally restricted euxassay_014138_03
TS23: pericardial component Weak Regionally restricted euxassay_014138_03
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_03
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_014138_03
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_03
TS23: hand Weak Regionally restricted euxassay_014138_03
TS23: upper arm muscle Weak Regionally restricted euxassay_014138_03
Specimen euxassay_014138_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_04
TS23: facial ganglion Strong Regionally restricted euxassay_014138_04
TS23: diaphragm Weak Regionally restricted euxassay_014138_04
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_04
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_04
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_014138_04
TS23: hand Weak Regionally restricted euxassay_014138_04
TS23: upper arm muscle Weak Regionally restricted euxassay_014138_04
TS23: stomach Weak Regionally restricted euxassay_014138_04
Specimen euxassay_014138_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_05
TS23: facial ganglion Strong Regionally restricted euxassay_014138_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014138_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014138_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_05
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_014138_05
TS23: diaphragm Weak Regionally restricted euxassay_014138_05
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_05
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_05
TS23: hand Weak Regionally restricted euxassay_014138_05
TS23: upper arm muscle Weak Regionally restricted euxassay_014138_05
TS23: stomach Weak Regionally restricted euxassay_014138_05
Specimen euxassay_014138_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014138_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014138_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_06
TS23: facial ganglion Strong Regionally restricted euxassay_014138_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_06
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_014138_06
TS23: renal cortex Moderate Regionally restricted euxassay_014138_06
TS23: diaphragm Weak Regionally restricted euxassay_014138_06
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_06
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_06
TS23: stomach Weak Regionally restricted euxassay_014138_06
Specimen euxassay_014138_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_07
TS23: spinal cord Strong Regionally restricted euxassay_014138_07
TS23: vagus ganglion Strong Regionally restricted euxassay_014138_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014138_07
TS23: cervical ganglion Strong Regionally restricted euxassay_014138_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_07
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_014138_07
TS23: renal cortex Moderate Regionally restricted euxassay_014138_07
TS23: diaphragm Weak Regionally restricted euxassay_014138_07
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_07
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_07
TS23: stomach Weak Regionally restricted euxassay_014138_07
Specimen euxassay_014138_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_08
TS23: spinal cord Strong Regionally restricted euxassay_014138_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_08
TS23: vagus ganglion Strong Regionally restricted euxassay_014138_08
TS23: cervical ganglion Strong Regionally restricted euxassay_014138_08
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_014138_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_08
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_014138_08
TS23: renal cortex Moderate Regionally restricted euxassay_014138_08
TS23: diaphragm Weak Regionally restricted euxassay_014138_08
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_08
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_08
TS23: stomach Weak Regionally restricted euxassay_014138_08
Specimen euxassay_014138_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_09
TS23: spinal cord Strong Regionally restricted euxassay_014138_09
TS23: trigeminal nerve Strong Regionally restricted euxassay_014138_09
TS23: thoracic ganglion Strong Regionally restricted euxassay_014138_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_09
TS23: renal cortex Moderate Regionally restricted euxassay_014138_09
TS23: ureter Moderate Regionally restricted euxassay_014138_09
TS23: diaphragm Weak Regionally restricted euxassay_014138_09
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_09
TS23: stomach Weak Regionally restricted euxassay_014138_09
Specimen euxassay_014138_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_10
TS23: spinal cord Strong Regionally restricted euxassay_014138_10
TS23: thoracic ganglion Strong Regionally restricted euxassay_014138_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_10
TS23: ureter Moderate Regionally restricted euxassay_014138_10
TS23: diaphragm Weak Regionally restricted euxassay_014138_10
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_10
TS23: stomach Weak Regionally restricted euxassay_014138_10
TS23: midgut Weak Regionally restricted euxassay_014138_10
Specimen euxassay_014138_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_11
TS23: spinal cord Strong Regionally restricted euxassay_014138_11
TS23: thoracic ganglion Strong Regionally restricted euxassay_014138_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_11
TS23: tongue muscle Moderate Regionally restricted euxassay_014138_11
TS23: diaphragm Weak Regionally restricted euxassay_014138_11
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_11
TS23: midgut Weak Regionally restricted euxassay_014138_11
Specimen euxassay_014138_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_12
TS23: spinal cord Strong Regionally restricted euxassay_014138_12
TS23: thoracic ganglion Strong Regionally restricted euxassay_014138_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_12
TS23: tongue muscle Moderate Regionally restricted euxassay_014138_12
TS23: diaphragm Weak Regionally restricted euxassay_014138_12
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_12
TS23: midgut Weak Regionally restricted euxassay_014138_12
TS23: bladder Weak Regionally restricted euxassay_014138_12
Specimen euxassay_014138_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_13
TS23: spinal cord Strong Regionally restricted euxassay_014138_13
TS23: thoracic ganglion Strong Regionally restricted euxassay_014138_13
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_014138_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_13
TS23: vomeronasal organ Strong Regionally restricted euxassay_014138_13
TS23: tongue muscle Moderate Regionally restricted euxassay_014138_13
TS23: diaphragm Weak Regionally restricted euxassay_014138_13
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_13
TS23: midgut Weak Regionally restricted euxassay_014138_13
TS23: bladder Weak Regionally restricted euxassay_014138_13
Specimen euxassay_014138_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_14
TS23: spinal cord Strong Regionally restricted euxassay_014138_14
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_014138_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_14
TS23: tongue muscle Moderate Regionally restricted euxassay_014138_14
TS23: diaphragm Weak Regionally restricted euxassay_014138_14
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_14
TS23: midgut Weak Regionally restricted euxassay_014138_14
TS23: bladder Weak Regionally restricted euxassay_014138_14
Specimen euxassay_014138_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_15
TS23: spinal cord Strong Regionally restricted euxassay_014138_15
TS23: cervical ganglion Strong Regionally restricted euxassay_014138_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_15
TS23: tongue muscle Moderate Regionally restricted euxassay_014138_15
TS23: renal cortex Moderate Regionally restricted euxassay_014138_15
TS23: ureter Moderate Regionally restricted euxassay_014138_15
TS23: diaphragm Weak Regionally restricted euxassay_014138_15
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_15
TS23: midgut Weak Regionally restricted euxassay_014138_15
TS23: bladder Weak Regionally restricted euxassay_014138_15
Specimen euxassay_014138_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014138_16
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_014138_16
TS23: trigeminal nerve Strong Regionally restricted euxassay_014138_16
TS23: cervical ganglion Strong Regionally restricted euxassay_014138_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014138_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_16
TS23: vomeronasal organ Strong Regionally restricted euxassay_014138_16
TS23: tongue muscle Moderate Regionally restricted euxassay_014138_16
TS23: ureter Moderate Regionally restricted euxassay_014138_16
TS23: renal cortex Moderate Regionally restricted euxassay_014138_16
TS23: diaphragm Weak Regionally restricted euxassay_014138_16
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_16
TS23: midgut Weak Regionally restricted euxassay_014138_16
Specimen euxassay_014138_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_17
TS23: facial ganglion Strong Regionally restricted euxassay_014138_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014138_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_17
TS23: renal cortex Moderate Regionally restricted euxassay_014138_17
TS23: diaphragm Weak Regionally restricted euxassay_014138_17
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_17
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_17
TS23: midgut Weak Regionally restricted euxassay_014138_17
Specimen euxassay_014138_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_18
TS23: facial ganglion Strong Regionally restricted euxassay_014138_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_014138_18
TS23: renal cortex Moderate Regionally restricted euxassay_014138_18
TS23: diaphragm Weak Regionally restricted euxassay_014138_18
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_18
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_18
TS23: midgut Weak Regionally restricted euxassay_014138_18
Specimen euxassay_014138_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_19
TS23: facial ganglion Strong Regionally restricted euxassay_014138_19
TS23: diaphragm Weak Regionally restricted euxassay_014138_19
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_19
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_19
TS23: midgut Weak Regionally restricted euxassay_014138_19
Specimen euxassay_014138_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014138_20
TS23: diaphragm Weak Regionally restricted euxassay_014138_20
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_20
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_20
TS23: midgut Weak Regionally restricted euxassay_014138_20
Specimen euxassay_014138_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_21
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_014138_21
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_21
TS23: diaphragm Weak Regionally restricted euxassay_014138_21
TS23: upper arm muscle Weak Regionally restricted euxassay_014138_21
Specimen euxassay_014138_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_014138_22
TS23: neural retina Strong Regionally restricted euxassay_014138_22
TS23: vibrissa dermal component Moderate Regionally restricted euxassay_014138_22
TS23: vertebral axis musculature Weak Regionally restricted euxassay_014138_22
TS23: diaphragm Weak Regionally restricted euxassay_014138_22
TS23: upper leg muscle Weak Regionally restricted euxassay_014138_22
TS23: upper arm muscle Weak Regionally restricted euxassay_014138_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory