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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826010
Gene symbol: Lrrtm4
Gene name: leucine rich repeat transmembrane neuronal 4
Probe: T38226
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013925_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_03
Specimen euxassay_013925_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_04
Specimen euxassay_013925_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_05
Specimen euxassay_013925_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013925_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_06
Specimen euxassay_013925_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_07
Specimen euxassay_013925_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_08
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_013925_08
Specimen euxassay_013925_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_09
Specimen euxassay_013925_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_10
Specimen euxassay_013925_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_11
Specimen euxassay_013925_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_12
Specimen euxassay_013925_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_13
Specimen euxassay_013925_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013925_14
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_14
Specimen euxassay_013925_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013925_15
TS23: midbrain tegmentum Weak Regionally restricted euxassay_013925_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_15
Specimen euxassay_013925_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013925_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_16
Specimen euxassay_013925_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013925_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_17
Specimen euxassay_013925_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013925_18
Specimen euxassay_013925_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_19
Specimen euxassay_013925_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_20
Specimen euxassay_013925_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_21
Specimen euxassay_013925_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory