About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826010
Gene symbol: Lrrtm4
Gene name: leucine rich repeat transmembrane neuronal 4
Probe: T38226
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013925_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_03
Specimen euxassay_013925_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_04
Specimen euxassay_013925_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_05
Specimen euxassay_013925_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013925_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_06
Specimen euxassay_013925_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_07
Specimen euxassay_013925_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_08
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_013925_08
Specimen euxassay_013925_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_09
Specimen euxassay_013925_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_10
Specimen euxassay_013925_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_11
Specimen euxassay_013925_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_12
Specimen euxassay_013925_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_013925_13
Specimen euxassay_013925_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013925_14
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013925_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_14
Specimen euxassay_013925_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013925_15
TS23: midbrain tegmentum Weak Regionally restricted euxassay_013925_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_15
Specimen euxassay_013925_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013925_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013925_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013925_16
Specimen euxassay_013925_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_013925_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013925_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013925_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_013925_17
Specimen euxassay_013925_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013925_18
Specimen euxassay_013925_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_19
Specimen euxassay_013925_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_20
Specimen euxassay_013925_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_21
Specimen euxassay_013925_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_013925_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory