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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826006
Gene symbol: Lrrn3
Gene name: leucine rich repeat protein 3, neuronal
Probe: T63237
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015911_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_015911_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_01
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_01
TS23: neural retina Weak Regionally restricted euxassay_015911_01
Specimen euxassay_015911_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_015911_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_02
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015911_02
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_02
TS23: stomach Weak Regionally restricted euxassay_015911_02
TS23: upper lip Moderate Regionally restricted euxassay_015911_02
Specimen euxassay_015911_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_015911_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_03
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_03
TS23: stomach Weak Regionally restricted euxassay_015911_03
TS23: upper lip Moderate Regionally restricted euxassay_015911_03
Specimen euxassay_015911_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_015911_04
TS23: facial ganglion Moderate Regionally restricted euxassay_015911_04
TS23: stomach Weak Regionally restricted euxassay_015911_04
Specimen euxassay_015911_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_05
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_015911_05
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_05
TS23: facial ganglion Moderate Regionally restricted euxassay_015911_05
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_05
TS23: stomach Weak Regionally restricted euxassay_015911_05
Specimen euxassay_015911_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_06
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_015911_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_06
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015911_06
TS23: facial ganglion Moderate Regionally restricted euxassay_015911_06
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_06
TS23: stomach Weak Regionally restricted euxassay_015911_06
TS23: lower lip Weak Regionally restricted euxassay_015911_06
Specimen euxassay_015911_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_015911_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_07
TS23: trigeminal nerve Moderate Regionally restricted euxassay_015911_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015911_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015911_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_015911_07
TS23: stomach Weak Regionally restricted euxassay_015911_07
Specimen euxassay_015911_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_015911_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_08
TS23: cervical ganglion Weak Regionally restricted euxassay_015911_08
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015911_08
TS23: stomach Weak Regionally restricted euxassay_015911_08
Specimen euxassay_015911_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_09
TS23: cervical ganglion Weak Regionally restricted euxassay_015911_09
TS23: adrenal medulla Weak Regionally restricted euxassay_015911_09
Specimen euxassay_015911_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_10
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_015911_10
TS23: adrenal medulla Weak Regionally restricted euxassay_015911_10
TS23: pituitary gland Weak Regionally restricted euxassay_015911_10
Specimen euxassay_015911_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_015911_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_015911_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_11
TS23: adrenal medulla Weak Regionally restricted euxassay_015911_11
TS23: pituitary gland Weak Regionally restricted euxassay_015911_11
Specimen euxassay_015911_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_015911_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_015911_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_015911_12
TS23: pituitary gland Weak Regionally restricted euxassay_015911_12
TS23: trachea Weak Regionally restricted euxassay_015911_12
Specimen euxassay_015911_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_015911_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_13
TS23: thoracic ganglion Weak Regionally restricted euxassay_015911_13
TS23: pituitary gland Weak Regionally restricted euxassay_015911_13
TS23: trachea Weak Regionally restricted euxassay_015911_13
Specimen euxassay_015911_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_015911_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_015911_14
TS23: trigeminal nerve Moderate Regionally restricted euxassay_015911_14
TS23: pituitary gland Weak Regionally restricted euxassay_015911_14
Specimen euxassay_015911_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_015911_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_015911_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_15
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_015911_15
TS23: cervical ganglion Weak Regionally restricted euxassay_015911_15
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015911_15
TS23: lower lip Weak Regionally restricted euxassay_015911_15
Specimen euxassay_015911_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_015911_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_015911_16
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015911_16
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015911_16
TS23: adrenal medulla Weak Regionally restricted euxassay_015911_16
TS23: lower lip Weak Regionally restricted euxassay_015911_16
Specimen euxassay_015911_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_015911_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_17
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_015911_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_015911_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_015911_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015911_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015911_17
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_015911_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_015911_17
TS23: facial ganglion Moderate Regionally restricted euxassay_015911_17
TS23: adrenal medulla Weak Regionally restricted euxassay_015911_17
TS23: upper lip Moderate Regionally restricted euxassay_015911_17
TS23: lower lip Weak Regionally restricted euxassay_015911_17
Specimen euxassay_015911_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_015911_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_015911_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015911_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015911_18
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_18
TS23: upper lip Moderate Regionally restricted euxassay_015911_18
Specimen euxassay_015911_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_015911_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_015911_19
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_19
TS23: neural retina Weak Regionally restricted euxassay_015911_19
Specimen euxassay_015911_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_20
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_015911_20
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_20
TS23: neural retina Weak Regionally restricted euxassay_015911_20
Specimen euxassay_015911_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_21
TS23: inner ear vestibular component Weak Regionally restricted euxassay_015911_21
TS23: neural retina Weak Regionally restricted euxassay_015911_21
Specimen euxassay_015911_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_015911_22
TS23: ear Weak Regionally restricted euxassay_015911_22
TS23: neural retina Weak Regionally restricted euxassay_015911_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory