About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826004
Gene symbol: Lrrn1
Gene name: leucine rich repeat protein 1, neuronal
Probe: IMAGE clone 351947
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000278_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_01
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_01
TS23: limb Moderate Regionally restricted euxassay_000278_01
TS23: limb musculature Present euxassay_000278_01
TS23: cochlea Strong Regionally restricted euxassay_000278_01
Specimen euxassay_000278_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_02
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_02
TS23: limb Moderate Regionally restricted euxassay_000278_02
TS23: limb musculature Present euxassay_000278_02
TS23: lower lip Moderate Regionally restricted euxassay_000278_02
TS23: upper lip Moderate Regionally restricted euxassay_000278_02
TS23: vibrissa Moderate Regionally restricted euxassay_000278_02
TS23: cochlea Strong Regionally restricted euxassay_000278_02
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_02
Specimen euxassay_000278_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_03
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_03
TS23: upper lip Moderate Regionally restricted euxassay_000278_03
TS23: lower lip Moderate Regionally restricted euxassay_000278_03
TS23: vibrissa Moderate Regionally restricted euxassay_000278_03
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_03
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_03
Specimen euxassay_000278_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_04
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_04
TS23: lower lip Moderate Regionally restricted euxassay_000278_04
TS23: upper lip Moderate Regionally restricted euxassay_000278_04
TS23: vibrissa Moderate Regionally restricted euxassay_000278_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_04
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_04
Specimen euxassay_000278_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_05
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_05
TS23: lower lip Moderate Regionally restricted euxassay_000278_05
TS23: upper lip Moderate Regionally restricted euxassay_000278_05
TS23: vibrissa Moderate Regionally restricted euxassay_000278_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_05
Specimen euxassay_000278_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_06
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_06
TS23: lower lip Moderate Regionally restricted euxassay_000278_06
TS23: upper lip Moderate Regionally restricted euxassay_000278_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_06
TS23: pons marginal layer Moderate Regionally restricted euxassay_000278_06
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_06
Specimen euxassay_000278_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_07
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_07
TS23: tail Moderate Regionally restricted euxassay_000278_07 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_07
TS23: upper lip Moderate Regionally restricted euxassay_000278_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_07
TS23: pons marginal layer Moderate Regionally restricted euxassay_000278_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_07
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_07
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_07
Specimen euxassay_000278_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_08
TS23: tail Moderate Regionally restricted euxassay_000278_08 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_08
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_000278_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_08
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_08
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_08
Specimen euxassay_000278_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_09
TS23: tail Moderate Regionally restricted euxassay_000278_09 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_09
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_000278_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_09
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_09
Specimen euxassay_000278_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_10
TS23: tail Moderate Regionally restricted euxassay_000278_10 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_10
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_000278_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_10
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000278_10
Specimen euxassay_000278_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_11
TS23: tail Moderate Regionally restricted euxassay_000278_11 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_11
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_000278_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_11
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_000278_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000278_11
Specimen euxassay_000278_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_12
TS23: tail Moderate Regionally restricted euxassay_000278_12 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_12
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_000278_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_12
TS23: midbrain marginal layer Moderate Regionally restricted euxassay_000278_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_000278_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_12
Specimen euxassay_000278_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_13
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_13
TS23: tail Moderate Regionally restricted euxassay_000278_13 muscle
TS23: lower lip Moderate Regionally restricted euxassay_000278_13
TS23: tongue mesenchyme Moderate Regionally restricted euxassay_000278_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_000278_13
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_13
Specimen euxassay_000278_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_14
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_14
TS23: lower lip Moderate Regionally restricted euxassay_000278_14
TS23: upper lip Moderate Regionally restricted euxassay_000278_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_14
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_14
Specimen euxassay_000278_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_15
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_15
TS23: lower lip Moderate Regionally restricted euxassay_000278_15
TS23: upper lip Moderate Regionally restricted euxassay_000278_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_000278_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_000278_15
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_000278_15
Specimen euxassay_000278_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_16
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_16
TS23: lower lip Moderate Regionally restricted euxassay_000278_16
TS23: upper lip Moderate Regionally restricted euxassay_000278_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_16
TS23: pons marginal layer Moderate Regionally restricted euxassay_000278_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_16
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_16
Specimen euxassay_000278_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_17
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_17
TS23: lower lip Moderate Regionally restricted euxassay_000278_17
TS23: upper lip Moderate Regionally restricted euxassay_000278_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_17
TS23: pons marginal layer Moderate Regionally restricted euxassay_000278_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_000278_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_000278_17
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_000278_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_17
Specimen euxassay_000278_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_18
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_18
TS23: lower lip Moderate Regionally restricted euxassay_000278_18
TS23: upper lip Moderate Regionally restricted euxassay_000278_18
TS23: vibrissa Moderate Regionally restricted euxassay_000278_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_18
Specimen euxassay_000278_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_19
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_19
TS23: limb Moderate Regionally restricted euxassay_000278_19
TS23: limb musculature Present euxassay_000278_19
TS23: upper lip Moderate Regionally restricted euxassay_000278_19
TS23: lower lip Moderate Regionally restricted euxassay_000278_19
TS23: vibrissa Moderate Regionally restricted euxassay_000278_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_19
Specimen euxassay_000278_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_20
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_20
TS23: limb Moderate Regionally restricted euxassay_000278_20
TS23: limb musculature Present euxassay_000278_20
TS23: lower lip Moderate Regionally restricted euxassay_000278_20
TS23: upper lip Moderate Regionally restricted euxassay_000278_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_000278_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_20
Specimen euxassay_000278_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_21
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_21
TS23: limb Moderate Regionally restricted euxassay_000278_21
TS23: limb musculature Present euxassay_000278_21
TS23: cochlea Strong Regionally restricted euxassay_000278_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_000278_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_000278_21
Specimen euxassay_000278_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_22
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_22
TS23: limb Moderate Regionally restricted euxassay_000278_22
TS23: limb musculature Present euxassay_000278_22
TS23: cochlea Strong Regionally restricted euxassay_000278_22
Specimen euxassay_000278_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_23
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_23
TS23: limb Moderate Regionally restricted euxassay_000278_23
TS23: limb musculature Present euxassay_000278_23
Specimen euxassay_000278_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000278_24
TS23: head mesenchyme Moderate Regionally restricted euxassay_000278_24
TS23: limb Moderate Regionally restricted euxassay_000278_24
TS23: limb musculature Present euxassay_000278_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory