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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825931
Gene symbol: Lin7a
Gene name: lin-7 homolog A, crumbs cell polarity complex component
Probe: T36590
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011082_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011082_01
TS23: neural retina Weak Regionally restricted euxassay_011082_01
Specimen euxassay_011082_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011082_02
TS23: neural retina Weak Regionally restricted euxassay_011082_02
Specimen euxassay_011082_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_011082_03
TS23: neural retina Weak Regionally restricted euxassay_011082_03
Specimen euxassay_011082_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_011082_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_04
TS23: lung Weak Regionally restricted euxassay_011082_04
Specimen euxassay_011082_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011082_05
TS23: facial ganglion Strong Regionally restricted euxassay_011082_05
TS23: lung Moderate Regionally restricted euxassay_011082_05
Specimen euxassay_011082_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011082_06
TS23: facial ganglion Strong Regionally restricted euxassay_011082_06
TS23: lung Moderate Regionally restricted euxassay_011082_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_06
Specimen euxassay_011082_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011082_07
TS23: lung Moderate Regionally restricted euxassay_011082_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_07
Specimen euxassay_011082_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011082_08
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011082_08
TS23: lung Moderate Regionally restricted euxassay_011082_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011082_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_08
Specimen euxassay_011082_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Regionally restricted euxassay_011082_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_09
TS23: lung Moderate Regionally restricted euxassay_011082_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_09
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_09
Specimen euxassay_011082_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_10
TS23: lung Moderate Regionally restricted euxassay_011082_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_10
TS23: cervical ganglion Weak Regionally restricted euxassay_011082_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_10
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_10
TS23: ventral grey horn Moderate Single cells euxassay_011082_10
Specimen euxassay_011082_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011082_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_11
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011082_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_11
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_11
TS23: ventral grey horn Moderate Single cells euxassay_011082_11
Specimen euxassay_011082_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011082_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_12
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_011082_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_12
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_12
TS23: ventral grey horn Moderate Single cells euxassay_011082_12
Specimen euxassay_011082_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011082_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_011082_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_13
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_13
TS23: ventral grey horn Moderate Single cells euxassay_011082_13
Specimen euxassay_011082_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011082_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_011082_14
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_011082_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_14
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_14
TS23: ventral grey horn Moderate Single cells euxassay_011082_14
Specimen euxassay_011082_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011082_15
TS23: thoracic ganglion Weak Regionally restricted euxassay_011082_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_15
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_15
TS23: ventral grey horn Moderate Single cells euxassay_011082_15
Specimen euxassay_011082_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_011082_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_16
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_16
TS23: ventral grey horn Weak Single cells euxassay_011082_16
Specimen euxassay_011082_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_011082_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_17
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011082_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_17
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_17
TS23: ventral grey horn Moderate Single cells euxassay_011082_17
Specimen euxassay_011082_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_18
TS23: lung Moderate Regionally restricted euxassay_011082_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_18
TS23: cervical ganglion Weak Regionally restricted euxassay_011082_18
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_011082_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_18
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_011082_18
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_18
Specimen euxassay_011082_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011082_19
TS23: vagus ganglion Moderate Regionally restricted euxassay_011082_19
TS23: lung Moderate Regionally restricted euxassay_011082_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011082_19
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_011082_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_19
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011082_19
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_011082_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_011082_19
TS23: telencephalon mantle layer Moderate Single cells euxassay_011082_19
Specimen euxassay_011082_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_011082_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_20
TS23: lung Moderate Regionally restricted euxassay_011082_20
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_011082_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_011082_20
Specimen euxassay_011082_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_21
TS23: facial ganglion Moderate Regionally restricted euxassay_011082_21
TS23: lung Moderate Regionally restricted euxassay_011082_21
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_011082_21
Specimen euxassay_011082_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_22
TS23: lung Moderate Regionally restricted euxassay_011082_22
Specimen euxassay_011082_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_23
TS23: lung Moderate Regionally restricted euxassay_011082_23
Specimen euxassay_011082_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011082_24
TS23: neural retina Weak Regionally restricted euxassay_011082_24
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011082_24
TS23: lung Moderate Regionally restricted euxassay_011082_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory