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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825929
Gene symbol: Lims1
Gene name: LIM and senescent cell antigen-like domains 1
Probe: MGC clone 11585
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003410_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver and biliary system Strong Single cells euxassay_003410_01
TS23: liver Strong Single cells euxassay_003410_01
TS23: stomach Moderate Spotted euxassay_003410_01
TS23: gut Moderate Regionally restricted euxassay_003410_01 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_01
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_01
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_01
Specimen euxassay_003410_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_02
TS23: stomach Moderate Spotted euxassay_003410_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_02
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_02
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_02
Specimen euxassay_003410_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_03
TS23: stomach Moderate Spotted euxassay_003410_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_03
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_03
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_03
Specimen euxassay_003410_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_04
TS23: stomach Moderate Spotted euxassay_003410_04
TS23: lung Moderate Single cells euxassay_003410_04
TS23: vibrissa Moderate Regionally restricted euxassay_003410_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_04
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_04
Specimen euxassay_003410_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_05
TS23: stomach Moderate Spotted euxassay_003410_05
TS23: lung Moderate Single cells euxassay_003410_05
TS23: vibrissa Moderate Regionally restricted euxassay_003410_05
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_05
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_05
Specimen euxassay_003410_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_06
TS23: stomach Moderate Spotted euxassay_003410_06
TS23: lung Moderate Single cells euxassay_003410_06
TS23: vibrissa Moderate Regionally restricted euxassay_003410_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_06
TS23: gut Moderate Regionally restricted euxassay_003410_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_06
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_06
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_06
Specimen euxassay_003410_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_07
TS23: stomach Moderate Spotted euxassay_003410_07
TS23: lung Moderate Single cells euxassay_003410_07
TS23: heart Moderate Regionally restricted euxassay_003410_07
TS23: vibrissa Moderate Regionally restricted euxassay_003410_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_07
TS23: gut Moderate Regionally restricted euxassay_003410_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_07
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_07
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_07
Specimen euxassay_003410_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_08
TS23: stomach Moderate Spotted euxassay_003410_08
TS23: lung Moderate Single cells euxassay_003410_08
TS23: heart Moderate Regionally restricted euxassay_003410_08
TS23: metanephros Moderate Regionally restricted euxassay_003410_08
TS23: vibrissa Moderate Regionally restricted euxassay_003410_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003410_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_08
TS23: gut Moderate Regionally restricted euxassay_003410_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_08
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_08
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_08
Specimen euxassay_003410_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_09
TS23: stomach Moderate Spotted euxassay_003410_09
TS23: lung Moderate Single cells euxassay_003410_09
TS23: heart Moderate Regionally restricted euxassay_003410_09
TS23: metanephros Moderate Regionally restricted euxassay_003410_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003410_09
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_09
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_09
TS23: gut Moderate Regionally restricted euxassay_003410_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_09
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_09
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_09
Specimen euxassay_003410_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_10
TS23: stomach Moderate Spotted euxassay_003410_10
TS23: lung Moderate Single cells euxassay_003410_10
TS23: heart Moderate Regionally restricted euxassay_003410_10
TS23: metanephros Moderate Regionally restricted euxassay_003410_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003410_10
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_10
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_10
TS23: gut Moderate Regionally restricted euxassay_003410_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_10
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_10
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_10
Specimen euxassay_003410_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_11
TS23: lung Moderate Single cells euxassay_003410_11
TS23: heart Moderate Regionally restricted euxassay_003410_11
TS23: metanephros Moderate Regionally restricted euxassay_003410_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003410_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003410_11
TS23: gut Moderate Regionally restricted euxassay_003410_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_11
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_11
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003410_11
Specimen euxassay_003410_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_12
TS23: lung Moderate Single cells euxassay_003410_12
TS23: heart Moderate Regionally restricted euxassay_003410_12
TS23: bladder Moderate Regionally restricted euxassay_003410_12
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003410_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003410_12
TS23: gut Moderate Regionally restricted euxassay_003410_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_12
TS23: tongue Moderate Regionally restricted euxassay_003410_12 smooth muscle
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_12
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003410_12
Specimen euxassay_003410_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_13
TS23: lung Moderate Single cells euxassay_003410_13
TS23: heart Moderate Regionally restricted euxassay_003410_13
TS23: bladder Moderate Regionally restricted euxassay_003410_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_003410_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003410_13
TS23: gut Moderate Regionally restricted euxassay_003410_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_13
TS23: tongue Moderate Regionally restricted euxassay_003410_13 smooth muscle
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_13
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003410_13
Specimen euxassay_003410_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_14
TS23: lung Moderate Single cells euxassay_003410_14
TS23: heart Moderate Regionally restricted euxassay_003410_14
TS23: bladder Moderate Regionally restricted euxassay_003410_14
TS23: gut Moderate Regionally restricted euxassay_003410_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_14
TS23: tongue Moderate Regionally restricted euxassay_003410_14 smooth muscle
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_14
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003410_14
Specimen euxassay_003410_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_15
TS23: lung Moderate Single cells euxassay_003410_15
TS23: heart Moderate Regionally restricted euxassay_003410_15
TS23: bladder Moderate Regionally restricted euxassay_003410_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003410_15
TS23: gut Moderate Regionally restricted euxassay_003410_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_15
TS23: tongue Moderate Regionally restricted euxassay_003410_15 smooth muscle
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003410_15
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_15
Specimen euxassay_003410_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_16
TS23: lung Moderate Single cells euxassay_003410_16
TS23: heart Moderate Regionally restricted euxassay_003410_16
TS23: bladder Moderate Regionally restricted euxassay_003410_16
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003410_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003410_16
TS23: gut Moderate Regionally restricted euxassay_003410_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_16
TS23: tongue Moderate Regionally restricted euxassay_003410_16 smooth muscle
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_16
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_16
Specimen euxassay_003410_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_17
TS23: lung Moderate Single cells euxassay_003410_17
TS23: metanephros Moderate Regionally restricted euxassay_003410_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_003410_17
TS23: gut Moderate Regionally restricted euxassay_003410_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_003410_17
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_17
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_17
Specimen euxassay_003410_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_18
TS23: lung Moderate Single cells euxassay_003410_18
TS23: metanephros Moderate Regionally restricted euxassay_003410_18
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_18
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_18
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_18
TS23: 4th ventricle Moderate Regionally restricted euxassay_003410_18
Specimen euxassay_003410_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_19
TS23: lung Moderate Single cells euxassay_003410_19
TS23: metanephros Moderate Regionally restricted euxassay_003410_19
TS23: vibrissa Moderate Regionally restricted euxassay_003410_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_003410_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_003410_19
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_19
Specimen euxassay_003410_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_20
TS23: lung Moderate Single cells euxassay_003410_20
TS23: vibrissa Moderate Regionally restricted euxassay_003410_20
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_20
Specimen euxassay_003410_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_21
TS23: lung Moderate Single cells euxassay_003410_21
TS23: vibrissa Moderate Regionally restricted euxassay_003410_21
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003410_21
Specimen euxassay_003410_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Single cells euxassay_003410_22
TS23: lung Moderate Single cells euxassay_003410_22
TS23: vibrissa Moderate Regionally restricted euxassay_003410_22
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_003410_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory