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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825901
Gene symbol: P3h1
Gene name: prolyl 3-hydroxylase 1
Probe: T30276
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010429_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_01
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_01
TS23: vault of skull Strong Regionally restricted euxassay_010429_01
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_01
TS23: basisphenoid bone Strong Regionally restricted euxassay_010429_01
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_01
TS23: radius Strong Regionally restricted euxassay_010429_01
TS23: ulna Strong Regionally restricted euxassay_010429_01
Specimen euxassay_010429_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_02
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_02
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_02
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_02
TS23: basisphenoid bone Strong Regionally restricted euxassay_010429_02
TS23: tibia Strong Regionally restricted euxassay_010429_02
TS23: humerus Strong Regionally restricted euxassay_010429_02
TS23: radius Strong Regionally restricted euxassay_010429_02
Specimen euxassay_010429_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_03
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_03
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_03
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_03
TS23: tibia Strong Regionally restricted euxassay_010429_03
TS23: fibula Strong Regionally restricted euxassay_010429_03
TS23: femur Strong Regionally restricted euxassay_010429_03
TS23: humerus Strong Regionally restricted euxassay_010429_03
Specimen euxassay_010429_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_04
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_04
TS23: mandible Strong Regionally restricted euxassay_010429_04
TS23: otic capsule Strong Regionally restricted euxassay_010429_04
TS23: tibia Strong Regionally restricted euxassay_010429_04
TS23: fibula Strong Regionally restricted euxassay_010429_04
TS23: femur Strong Regionally restricted euxassay_010429_04
TS23: humerus Strong Regionally restricted euxassay_010429_04
Specimen euxassay_010429_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_05
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_05
TS23: mandible Strong Regionally restricted euxassay_010429_05
TS23: otic capsule Strong Regionally restricted euxassay_010429_05
TS23: femur Strong Regionally restricted euxassay_010429_05
TS23: humerus Strong Regionally restricted euxassay_010429_05
Specimen euxassay_010429_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_06
TS23: mandible Strong Regionally restricted euxassay_010429_06
TS23: maxilla Strong Regionally restricted euxassay_010429_06
TS23: otic capsule Strong Regionally restricted euxassay_010429_06
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_06
Specimen euxassay_010429_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_07
TS23: maxilla Strong Regionally restricted euxassay_010429_07
TS23: mandible Strong Regionally restricted euxassay_010429_07
TS23: otic capsule Strong Regionally restricted euxassay_010429_07
TS23: clavicle Strong Regionally restricted euxassay_010429_07
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_07
Specimen euxassay_010429_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_08
TS23: maxilla Strong Regionally restricted euxassay_010429_08
TS23: mandible Strong Regionally restricted euxassay_010429_08
TS23: otic capsule Strong Regionally restricted euxassay_010429_08
TS23: clavicle Strong Regionally restricted euxassay_010429_08
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_08
Specimen euxassay_010429_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010429_09
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_09
TS23: maxilla Strong Regionally restricted euxassay_010429_09
TS23: mandible Strong Regionally restricted euxassay_010429_09
TS23: clavicle Strong Regionally restricted euxassay_010429_09
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_09
Specimen euxassay_010429_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010429_10
TS23: maxilla Strong Regionally restricted euxassay_010429_10
TS23: mandible Strong Regionally restricted euxassay_010429_10
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_10
Specimen euxassay_010429_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_11
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010429_11
TS23: maxilla Strong Regionally restricted euxassay_010429_11
TS23: mandible Strong Regionally restricted euxassay_010429_11
TS23: thyroid cartilage Weak Regionally restricted euxassay_010429_11
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_11
Specimen euxassay_010429_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_12
TS23: turbinate bone primordium Strong Regionally restricted euxassay_010429_12
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_12
TS23: maxilla Strong Regionally restricted euxassay_010429_12
TS23: mandible Strong Regionally restricted euxassay_010429_12
TS23: thyroid cartilage Strong Regionally restricted euxassay_010429_12
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_12
Specimen euxassay_010429_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_13
TS23: thyroid cartilage Moderate Regionally restricted euxassay_010429_13
TS23: axial skeleton Moderate Regionally restricted euxassay_010429_13
TS23: nasal septum Strong Regionally restricted euxassay_010429_13
Specimen euxassay_010429_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_14
TS23: otic capsule Strong Regionally restricted euxassay_010429_14
TS23: clavicle Strong Regionally restricted euxassay_010429_14
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_010429_14
TS23: nasal septum Strong Regionally restricted euxassay_010429_14
Specimen euxassay_010429_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_15
TS23: maxilla Strong Regionally restricted euxassay_010429_15
TS23: mandible Strong Regionally restricted euxassay_010429_15
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_15
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_15
TS23: nasal septum Strong Regionally restricted euxassay_010429_15
Specimen euxassay_010429_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_16
TS23: maxilla Strong Regionally restricted euxassay_010429_16
TS23: mandible Strong Regionally restricted euxassay_010429_16
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_16
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_16
TS23: nasal septum Strong Regionally restricted euxassay_010429_16
Specimen euxassay_010429_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_17
TS23: maxilla Strong Regionally restricted euxassay_010429_17
TS23: mandible Strong Regionally restricted euxassay_010429_17
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_17
Specimen euxassay_010429_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_18
TS23: maxilla Strong Regionally restricted euxassay_010429_18
TS23: mandible Strong Regionally restricted euxassay_010429_18
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_18
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_18
TS23: femur Strong Regionally restricted euxassay_010429_18
TS23: humerus Strong Regionally restricted euxassay_010429_18
Specimen euxassay_010429_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_010429_19
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_19
TS23: maxilla Strong Regionally restricted euxassay_010429_19
TS23: mandible Strong Regionally restricted euxassay_010429_19
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_19
TS23: femur Strong Regionally restricted euxassay_010429_19
TS23: humerus Strong Regionally restricted euxassay_010429_19
Specimen euxassay_010429_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vault of skull Strong Regionally restricted euxassay_010429_20
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_20
TS23: maxilla Strong Regionally restricted euxassay_010429_20
TS23: temporal bone petrous part Strong Regionally restricted euxassay_010429_20
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_20
TS23: humerus Strong Regionally restricted euxassay_010429_20
TS23: femur Moderate Regionally restricted euxassay_010429_20
Specimen euxassay_010429_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vault of skull Strong Regionally restricted euxassay_010429_21
TS23: orbito-sphenoid Strong Regionally restricted euxassay_010429_21
TS23: exoccipital bone Strong Regionally restricted euxassay_010429_21
TS23: humerus Strong Regionally restricted euxassay_010429_21
TS23: radius Strong Regionally restricted euxassay_010429_21
TS23: fibula Moderate Regionally restricted euxassay_010429_21
TS23: tibia Moderate Regionally restricted euxassay_010429_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory