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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825851
Gene symbol: L1cam
Gene name: L1 cell adhesion molecule
Probe: T30667
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009800_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_01
TS23: forebrain Strong Uniform euxassay_009800_01
Specimen euxassay_009800_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_02
TS23: facial ganglion Strong Regionally restricted euxassay_009800_02
TS23: forebrain Strong Uniform euxassay_009800_02
Specimen euxassay_009800_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_03
TS23: facial ganglion Strong Regionally restricted euxassay_009800_03
TS23: forebrain Strong Uniform euxassay_009800_03
TS23: hindbrain Strong Uniform euxassay_009800_03
Specimen euxassay_009800_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_04
TS23: facial ganglion Strong Regionally restricted euxassay_009800_04
TS23: hindbrain Strong Uniform euxassay_009800_04
TS23: forebrain Strong Uniform euxassay_009800_04
TS23: stomach Moderate Regionally restricted euxassay_009800_04
TS23: midgut Moderate Regionally restricted euxassay_009800_04
Specimen euxassay_009800_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_05
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009800_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009800_05
TS23: midbrain Strong Uniform euxassay_009800_05
TS23: hindbrain Strong Uniform euxassay_009800_05
TS23: forebrain Strong Uniform euxassay_009800_05
TS23: midgut Moderate Regionally restricted euxassay_009800_05
TS23: stomach Moderate Regionally restricted euxassay_009800_05
Specimen euxassay_009800_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009800_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_06
TS23: trigeminal nerve Strong Regionally restricted euxassay_009800_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_009800_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_06
TS23: midbrain Strong Uniform euxassay_009800_06
TS23: hindbrain Strong Uniform euxassay_009800_06
TS23: forebrain Strong Uniform euxassay_009800_06
TS23: midgut Moderate Regionally restricted euxassay_009800_06
TS23: stomach Moderate Regionally restricted euxassay_009800_06
Specimen euxassay_009800_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_009800_07
TS23: trigeminal nerve Strong Regionally restricted euxassay_009800_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_07
TS23: hindbrain Strong Uniform euxassay_009800_07
TS23: midbrain Strong Uniform euxassay_009800_07
TS23: forebrain Strong Uniform euxassay_009800_07
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_07
TS23: alar columns Moderate Uniform euxassay_009800_07
TS23: midgut Moderate Regionally restricted euxassay_009800_07
TS23: stomach Moderate Regionally restricted euxassay_009800_07
Specimen euxassay_009800_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_08
TS23: midbrain Strong Uniform euxassay_009800_08
TS23: hindbrain Strong Uniform euxassay_009800_08
TS23: forebrain Strong Uniform euxassay_009800_08
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_08
TS23: midgut Moderate Regionally restricted euxassay_009800_08
TS23: stomach Moderate Regionally restricted euxassay_009800_08
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009800_08
TS23: cervical ganglion Moderate Regionally restricted euxassay_009800_08
Specimen euxassay_009800_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_09
TS23: midbrain Strong Uniform euxassay_009800_09
TS23: hindbrain Strong Uniform euxassay_009800_09
TS23: forebrain Strong Uniform euxassay_009800_09
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_09
TS23: alar columns Moderate Uniform euxassay_009800_09
TS23: midgut Moderate Regionally restricted euxassay_009800_09
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009800_09
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009800_09
Specimen euxassay_009800_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_10
TS23: midbrain Strong Uniform euxassay_009800_10
TS23: hindbrain Strong Uniform euxassay_009800_10
TS23: forebrain Strong Uniform euxassay_009800_10
TS23: alar columns Moderate Uniform euxassay_009800_10
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_10
TS23: midgut Moderate Regionally restricted euxassay_009800_10
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009800_10
Specimen euxassay_009800_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_11
TS23: midbrain Strong Uniform euxassay_009800_11
TS23: hindbrain Strong Uniform euxassay_009800_11
TS23: forebrain Strong Uniform euxassay_009800_11
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_11
TS23: alar columns Moderate Uniform euxassay_009800_11
TS23: midgut Moderate Regionally restricted euxassay_009800_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009800_11
Specimen euxassay_009800_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_12
TS23: midbrain Strong Uniform euxassay_009800_12
TS23: hindbrain Strong Uniform euxassay_009800_12
TS23: forebrain Strong Uniform euxassay_009800_12
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_12
Specimen euxassay_009800_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_009800_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_13
TS23: hindbrain Strong Uniform euxassay_009800_13
TS23: forebrain Strong Uniform euxassay_009800_13
TS23: midbrain Strong Uniform euxassay_009800_13
TS23: alar columns Moderate Uniform euxassay_009800_13
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_13
Specimen euxassay_009800_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_14
TS23: hindbrain Strong Uniform euxassay_009800_14
TS23: forebrain Strong Uniform euxassay_009800_14
TS23: midbrain Strong Uniform euxassay_009800_14
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_14
TS23: alar columns Moderate Uniform euxassay_009800_14
TS23: cervical ganglion Moderate Regionally restricted euxassay_009800_14
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009800_14
Specimen euxassay_009800_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_15
TS23: vagus ganglion Strong Regionally restricted euxassay_009800_15
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_009800_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_15
TS23: midbrain Strong Uniform euxassay_009800_15
TS23: hindbrain Strong Uniform euxassay_009800_15
TS23: forebrain Strong Uniform euxassay_009800_15
TS23: ventral grey horn Strong Regionally restricted euxassay_009800_15
TS23: alar columns Moderate Uniform euxassay_009800_15
Specimen euxassay_009800_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_009800_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_16
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009800_16
TS23: facial ganglion Strong Regionally restricted euxassay_009800_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_16
TS23: midbrain Moderate Uniform euxassay_009800_16
TS23: hindbrain Moderate Uniform euxassay_009800_16
TS23: forebrain Moderate Uniform euxassay_009800_16
Specimen euxassay_009800_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009800_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_17
TS23: facial ganglion Strong Regionally restricted euxassay_009800_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_009800_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009800_17
TS23: midbrain Strong Uniform euxassay_009800_17
TS23: hindbrain Strong Uniform euxassay_009800_17
TS23: forebrain Strong Uniform euxassay_009800_17
Specimen euxassay_009800_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_18
TS23: facial ganglion Strong Regionally restricted euxassay_009800_18
TS23: midbrain Strong Uniform euxassay_009800_18
TS23: hindbrain Strong Uniform euxassay_009800_18
TS23: forebrain Strong Uniform euxassay_009800_18
TS23: neural retina Strong Regionally restricted euxassay_009800_18
Specimen euxassay_009800_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009800_19
TS23: facial ganglion Strong Regionally restricted euxassay_009800_19
TS23: hindbrain Strong Uniform euxassay_009800_19
TS23: forebrain Strong Uniform euxassay_009800_19
TS23: neural retina Strong Regionally restricted euxassay_009800_19
Specimen euxassay_009800_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009800_20
TS23: forebrain Strong Uniform euxassay_009800_20
TS23: neural retina Weak Regionally restricted euxassay_009800_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory